Evidence map›Paper›PMID 31988651›Full record

ArticlePlant methods2020

A high-throughput screening method to identify proteins involved in unfolded protein response of the endoplasmic reticulum in plants.

André Alcântara, Denise Seitner, Fernando Navarrete, Armin Djamei

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. A QuantitativeFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

André Alcântara1Gregor Mendel Institute of Molecular Plant Biology, Vienna, Austria.
Denise Seitner1Gregor Mendel Institute of Molecular Plant Biology, Vienna, Austria.
Fernando Navarrete1Gregor Mendel Institute of Molecular Plant Biology, Vienna, Austria.
Armin Djamei1Gregor Mendel Institute of Molecular Plant Biology, Vienna, Austria.ORCID 0000-0002-8087-9566
Gregor Mendel Institute of Molecular Plant Biology · AT

Funding

Austrian Science Fund FWF I 3033Austrian Science Fund FWF P 27818
6 · The paper itself

Abstract

backgroundThe unfolded protein response (UPR) is a highly conserved process in eukaryotic organisms that plays a crucial role in adaptation and development. While the most ubiquitous components of this pathway have been characterized, current efforts are focused on identifying and characterizing other UPR factors that play a role in specific conditions, such as developmental changes, abiotic cues, and biotic interactions. Considering the central role of protein secretion in plant pathogen interactions, there has also been a recent focus on understanding how pathogens manipulate their host's UPR to facilitate infection.

resultsWe developed a high-throughput screening assay to identify proteins that interfere with UPR signaling

conclusionsWe have established a rapid and reliable fluorescence-based method to identify heterologously expressed proteins involved in UPR stress in plants. This system can be used for initial screens with libraries of proteins and potentially other molecules to identify candidates for further validation and characterization.

Indexed as

High-throughputNicotiana benthamianaTransient expressionUnfolded protein response (UPR)Ustilago maydis

Identifiers

PMID31988651
PMCPMC6971872
OpenAlexW3002334343

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.