Evidence map›Paper›PMID 31988583›Full record

Observational studyWorld journal of gastroenterology2020

Assessment of lncRNA GAS5, lncRNA HEIH, lncRNA BISPR and its mRNA BST2 as serum innovative non-invasive biomarkers: Recent insights into Egyptian patients with hepatitis C virus type 4.

Nourhan M El Samaloty, Marwa I Shabayek, Ramy S Ghait, Shohda A El-Maraghy, Sherine M Rizk, Maha M El-Sawalhi

Open access · hybridAbstract readObservational Study
In one paragraph

Observational study in World journal of gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Nourhan M El SamalotyBiochemistry Section, Pharmacology, Toxicology and Biochemistry Department, Faculty of Pharmaceutical Sciences and Pharmaceutical Industries, Future University, Cairo 11795, Egypt.
Marwa I ShabayekBiochemistry Section, Pharmacology, Toxicology and Biochemistry Department, Faculty of Pharmaceutical Sciences and Pharmaceutical Industries, Future University, Cairo 11795, Egypt. marwa.ismail@fue.edu.eg.
Ramy S GhaitInternal Medicine, Gastroenterology and Hepatology Department, Faculty of Medicine, Ain Shams University, Cairo 11566, Egypt.
Shohda A El-MaraghyBiochemistry Department, Faculty of Pharmacy, Cairo University, Cairo 11562, Egypt.
Sherine M RizkBiochemistry Department, Faculty of Pharmacy, Cairo University, Cairo 11562, Egypt.
Maha M El-SawalhiBiochemistry Department, Faculty of Pharmacy, Cairo University, Cairo 11562, Egypt.
Cairo University · EGAin Shams University · EGFuture University in Egypt · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis C virus (HCV) infection and its consequent complications are undeniably a public health burden worldwide, particularly in Egypt. Emerging evidence suggests that many lncRNAs have relevant roles in viral infections and antiviral responses.

aimTo investigate the expression profiles of circulating lncRNAGAS5, lncRNAHEIH, lncRNABISPR and mRNABST2 in naïve, treated and relapsed HCV Egyptian patients, to elucidate relation to HCV infection and their efficacy as innovative biomarkers for the diagnosis and prognosis of HCV GT4.

methodsOne hundred and thirty HCV-infected Egyptian patients and 20 healthy controls were included in this study. Serum lncRNAs and mRNABST2 were measured using quantitative real-time polymerase chain reaction (qRT-PCR).

resultsOur results indicated that serum lncRNAGAS5 and LncRNABISPR were upregulated, whereas mRNA BST2 and LncRNA HEIH were downregulated in naïve patients. In contrast, HCV patients treated with sofosbuvir and simeprevir; with sofosbuvir and daclatasvir; or with sofosbuvir, daclatasvir and ribavirin exhibited lower levels of lncRNAGAS5 and lncRNABISPR with higher mRNABST2 compared to naïve patients. Notably, patients relapsed from sofosbuvir and simeprevir showed higher levels of these lncRNAs with lower mRNABST2 compared to treated patients. LncRNAGAS5 and lncRNABISPR were positively correlated with viral load and ALT at

conclusionDifferential expression of these RNAs suggests their involvement in HCV pathogenesis or antiviral response and highlights their promising roles in diagnosis and prognosis of HCV.

Indexed as

AdultAntigens, CDAntiviral AgentsBiomarkersBone Marrow Stromal Antigen 2Case-Control StudiesCell-Free Nucleic AcidsDown-RegulationDrug Therapy, CombinationEgyptFemaleGene Expression ProfilingGPI-Linked ProteinsHealthy VolunteersHepacivirusHepatitis CAntigens, CDAntiviral AgentsBiomarkersBone Marrow Stromal Antigen 2BST2 protein, humanCell-Free Nucleic AcidsGAS5 long non-coding RNA, humanGPI-Linked ProteinsRNA, Long NoncodingRNA, MessengerBiomarkersHepatitis ClncRNA BISPRlncRNA GAS5lncRNA HEIHmRNA BST2

Identifiers

PMID31988583
PMCPMC6962433
OpenAlexW3000606095

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.