Evidence map›Paper›PMID 31988381›Full record

ArticleNature microbiology2020

Combinatorial selection in amoebal hosts drives the evolution of the human pathogen Legionella pneumophila.

Jason M Park, Soma Ghosh, Tamara J O'Connor

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
18.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 121 citations in OpenAlex.

  1. Crystal structure of theVirulence · 2026
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  4. ACS infectious diseases · 2026
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  7. Molecular evolution and adaptations ofFrontiers in cellular and infection microbiology · 2026
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  8. Substrate-enhanced filamentation of 3-methylcrotonyl-CoA carboxylase inbioRxiv : the preprint server for biology · 2025
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  9. Crystal structure of thebioRxiv : the preprint server for biology · 2025
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  10. Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
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  13. OptimizedMicrobiology spectrum · 2025
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  17. ThemSphere · 2025
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  18. Journal of bacteriology · 2024
    Review
  19. Antibiotic susceptibility situation of environmentalJournal of water and health · 2024
    Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jason M Park *Department of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Soma Ghosh *Department of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-6729-4838
Tamara J O'ConnorDepartment of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD, USA. toconno7@jhmi.edu.ORCID http://orcid.org/0000-0003-2535-5820
Johns Hopkins University · US

Funding

Identifying genes essential for Legionella persistence and transmissionR21AI119580 · NIAID · JOHNS HOPKINS UNIVERSITY · PI O'CONNOR, TAMARA · 2015 to 2016
$446k
NIAID NIH HHS R21 AI119580
6 · The paper itself

Abstract

Virulence mechanisms typically evolve through the continual interaction of a pathogen with its host. In contrast, it is poorly understood how environmentally acquired pathogens are able to cause disease without prior interaction with humans. Here, we provide experimental evidence for the model that Legionella pathogenesis in humans results from the cumulative selective pressures of multiple amoebal hosts in the environment. Using transposon sequencing, we identify Legionella pneumophila genes required for growth in four diverse amoebae, defining universal virulence factors commonly required in all host cell types and amoeba-specific auxiliary genes that determine host range. By comparing genes that promote growth in amoebae and macrophages, we show that adaptation of L. pneumophila to each amoeba causes the accumulation of distinct virulence genes that collectively allow replication in macrophages and, in some cases, leads to redundancy in this host cell type. In contrast, some bacterial proteins that promote replication in amoebae restrict growth in macrophages. Thus, amoebae-imposed selection is a double-edged sword, having both positive and negative impacts on disease. Comparing the genome composition and host range of multiple Legionella species, we demonstrate that their distinct evolutionary trajectories in the environment have led to the convergent evolution of compensatory virulence mechanisms.

Indexed as

Biological CoevolutionAdaptation, PhysiologicalAmoebaAnimalsBacterial ProteinsCell LineFemaleHost-Pathogen InteractionsHost SpecificityHumansLegionella pneumophilaMacrophagesMicePhylogenyPrimary Cell CultureSelection, GeneticBacterial ProteinsVirulence Factors

Identifiers

PMID31988381
PMCPMC10234074
OpenAlexW3001744923

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.