Evidence map›Paper›PMID 31988277›Full record

ArticleNature communications2020

Geometric cues stabilise long-axis polarisation of PAR protein patterns in C. elegans.

Raphaela Geßele, Jacob Halatek, Laeschkir Würthner, Erwin Frey

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Signal control during tissue regeneration in adult animals.Nature reviews. Molecular cell biology · 2026
    Review
  4. 3D pattern formation of a protein-membrane suspension.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. A tractable physical model for the yeast polarity predicts epistasis and fitness.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Article
  9. Sensing the shape of a cell with reaction diffusion and energy minimization.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Article
  12. Delineating the mechanisms and design principles ofComputational and structural biotechnology journal · 2022
    Review
  13. Article
  14. Turing Patterning in Stratified Domains.Bulletin of mathematical biology · 2020
    Article
  15. Article
  16. Article
  17. Review
  18. Mechanochemical Control of Symmetry Breaking in theFrontiers in cell and developmental biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Raphaela GeßeleArnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Department of Physics, Ludwig-Maximilians-Universität München, Theresienstraße 37, 80333, München, Germany.
Jacob HalatekArnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Department of Physics, Ludwig-Maximilians-Universität München, Theresienstraße 37, 80333, München, Germany.ORCID http://orcid.org/0000-0003-3211-2253
Laeschkir WürthnerArnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Department of Physics, Ludwig-Maximilians-Universität München, Theresienstraße 37, 80333, München, Germany.
Erwin FreyArnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Department of Physics, Ludwig-Maximilians-Universität München, Theresienstraße 37, 80333, München, Germany. frey@lmu.de.ORCID http://orcid.org/0000-0001-8792-3358
Center for NanoScience · DE

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) QBM Graduate SchoolDeutsche Forschungsgemeinschaft (German Research Foundation) SFB1032
6 · The paper itself

Abstract

In the Caenorhabditis elegans zygote, PAR protein patterns, driven by mutual anatagonism, determine the anterior-posterior axis and facilitate the redistribution of proteins for the first cell division. Yet, the factors that determine the selection of the polarity axis remain unclear. We present a reaction-diffusion model in realistic cell geometry, based on biomolecular reactions and accounting for the coupling between membrane and cytosolic dynamics. We find that the kinetics of the phosphorylation-dephosphorylation cycle of PARs and the diffusive protein fluxes from the cytosol towards the membrane are crucial for the robust selection of the anterior-posterior axis for polarisation. The local ratio of membrane surface to cytosolic volume is the main geometric cue that initiates pattern formation, while the choice of the long-axis for polarisation is largely determined by the length of the aPAR-pPAR interface, and mediated by processes that minimise the diffusive fluxes of PAR proteins between cytosol and membrane.

Indexed as

Cell PolarityAnimalsAsymmetric Cell DivisionCaenorhabditis elegansCaenorhabditis elegans ProteinsComputational BiologyCytosolEmbryonic DevelopmentEmbryo, NonmammalianKineticsModels, BiologicalPhosphorylationSignal TransductionThermodynamicsCaenorhabditis elegans Proteins

Identifiers

PMID31988277
PMCPMC6985163
OpenAlexW3002222289

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.