Evidence map›Paper›PMID 31988185›Full record

ArticleDevelopment (Cambridge, England)2020

Optic cup morphogenesis requires neural crest-mediated basement membrane assembly.

Chase D Bryan, Macaulie A Casey, Rebecca L Pfeiffer, Bryan W Jones, Kristen M Kwan

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 58 citations in OpenAlex.

  1. Identification of novel genes regulating the development of the palate.Developmental dynamics : an official publication of the American Association of Anatomists · 2026
    Article
  2. Design and optimization of in situ self-functionalizing stress sensors.The European physical journal. E, Soft matter · 2026
    Article
  3. Article
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  5. Article
  6. Article
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  9. Review
  10. Zfp503/Nlz2 Is Required for RPE Differentiation and Optic Fissure Closure.Investigative ophthalmology & visual science · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Elevated TGFβ signaling contributes to ocular anterior segment dysgenesis in Col4a1 mutant mice.Matrix biology : journal of the International Society for Matrix Biology · 2022
    Article
  15. Pax2a, but not pax2b, influences cell survival and periocular mesenchyme localization to facilitate zebrafish optic fissure closure.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Eyes on CHARGE syndrome: Roles of CHD7 in ocular development.Frontiers in cell and developmental biology · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chase D BryanDepartment of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA.ORCID 0000-0003-0651-8997
Macaulie A CaseyDepartment of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA.ORCID 0000-0002-5421-6152
Rebecca L PfeifferDepartment of Ophthalmology and Visual Sciences, John A. Moran Eye Center, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.ORCID 0000-0002-4123-516X
Bryan W JonesDepartment of Ophthalmology and Visual Sciences, John A. Moran Eye Center, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.ORCID 0000-0001-5527-6643
Kristen M KwanDepartment of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA kmkwan@genetics.utah.edu.ORCID 0000-0003-0052-275X
University of Utah · US

Funding

University of Utah, Core Vision Research GrantP30EY014800 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Bryan William Jones · 2005 to 2026
$14.6M
DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007491 · NICHD · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI James Alan Gagnon, Kristen M Kwan · 1995 to 2026
$8.0M
Retinal RemodelingR01EY015128 · NEI · UNIVERSITY OF UTAH · PI JONES, BRYAN WILLIAM · 2004 to 2021
$7.0M
TRAINING PROGRAM IN GENETICST32GM007464 · NIGMS · UNIVERSITY OF UTAH · PI GRUNWALD, DAVID J., STANFIELD, GILLIAN · 1985 to 2020
$6.1M
Retinal CircuitryR01EY028927 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Bryan William Jones · 2019 to 2026
$5.2M
Hedgehog Signaling in Optic Fissure Morphogenesis and ColobomaR01EY025378 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Kristen M Kwan · 2015 to 2026
$3.2M
Stepwise Coordination of Eye Morphogenesis by Extracellular MatrixR01EY025780 · NEI · UNIVERSITY OF UTAH · PI KWAN, KRISTEN M · 2015 to 2024
$2.7M
NEI NIH HHS P30 EY014800NEI NIH HHS R01 EY015128NEI NIH HHS R01 EY025378NEI NIH HHS R01 EY025780NEI NIH HHS R01 EY028927NICHD NIH HHS T32 HD007491NIGMS NIH HHS T32 GM007464
6 · The paper itself

Abstract

Organogenesis requires precise interactions between a developing tissue and its environment. In vertebrates, the developing eye is surrounded by a complex extracellular matrix as well as multiple mesenchymal cell populations. Disruptions to either the matrix or periocular mesenchyme can cause defects in early eye development, yet in many cases the underlying mechanism is unknown. Here, using multidimensional imaging and computational analyses in zebrafish, we establish that cell movements in the developing optic cup require neural crest. Ultrastructural analysis reveals that basement membrane formation around the developing eye is also dependent on neural crest, but only specifically around the retinal pigment epithelium. Neural crest cells produce the extracellular matrix protein nidogen: impairing nidogen function disrupts eye development, and, strikingly, expression of nidogen in the absence of neural crest partially restores optic cup morphogenesis. These results demonstrate that eye formation is regulated in part by extrinsic control of extracellular matrix assembly.This article has an associated 'The people behind the papers' interview.

Indexed as

AllelesAnimalsBasement MembraneCalcium-Binding ProteinsCell MovementCRISPR-Cas SystemsElectrophoresis, CapillaryExtracellular MatrixExtracellular Matrix ProteinsEyeForkhead Transcription FactorsGene Expression Regulation, DevelopmentalGenotypeMesodermMicroscopy, Electron, TransmissionMorphogenesisCalcium-Binding ProteinsExtracellular Matrix ProteinsForkhead Transcription Factorsfoxd3 protein, zebrafishnid1a protein, zebrafishtfap2a protein, zebrafishTranscription Factor AP-2Zebrafish ProteinsBasement membraneExtracellular matrixEyeMorphogenesisNeural crestNidogen

Identifiers

PMID31988185
PMCPMC7044464
OpenAlexW3002266403

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.