Evidence map›Paper›PMID 31987149›Full record

ArticleAnalytica chimica acta2020

A highly sensitive and selective signal-on strategy for microRNA quantification.

Li Pan, Huaisheng Zhang, Jingjin Zhao, Xiangtang Li, Rui Xu, Yinyuan Mo, Paul B Tchounwou, Yi-Ming Liu

Open access · greenAbstract read
In one paragraph

Article in Analytica chimica acta, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Li PanDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA.
Huaisheng ZhangDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA.
Jingjin ZhaoDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA.
Xiangtang LiDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA.
Rui XuDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA.
Yinyuan MoDepartment of Pharmacology and Toxicology, University of Mississippi Medical Center, 2500 N. State St, Jackson, MS, 39250, USA.
Paul B TchounwouDepartment of Biology, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA.
Yi-Ming LiuDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St, Jackson, MS, 39217, USA. Electronic address: yiming.liu@jsums.edu.
Jackson State University · USUniversity of Mississippi Medical Center · US

Funding

RCMI-Center for Environmental HealthG12MD007581 · NIMHD · JACKSON STATE UNIVERSITY · PI TCHOUNWOU, PAUL B. · 2012 to 2017
$11.2M
Microfluidic mass spectrometry based fast chemical characterization of exosomesSC1GM089557 · NIGMS · JACKSON STATE UNIVERSITY · PI LIU, YIMING · 2010 to 2018
$1.4M
NIGMS NIH HHS SC1 GM089557NIMHD NIH HHS G12 MD007581
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are associated with physiological and pathological processes. They are recognized as biomarkers for diseases diagnosis and treatment evaluation. Herein we propose a simple and cost-effective HPLC method for quantitative assay of target miRNAs with femtomolar sensitivity, single-base discrimination selectivity and low background. The assay is based on an innovative signal-on strategy. In this strategy, polyadenylation of poly(A) polymerase extends an all 'A' sequence at the end of target miRNA, and the substantially increased number of adenine bases are labeled with 2-Chloroacetaldehyde (CAA) to open a signal-on mode and realize a signal amplification. The linearly amplified fluorescence signal is separated from other inference signals and quantified by high performance liquid chromatography with fluorescence detection (HPLC-FD). Combining with affinity magnetic solid phase extraction (MSPE), the method is well suited for analysis of complex biological samples such as serum and cell lysate with nearly zero background fluorescence. Taking miRNA-21 as the model analyte, this absolute quantification method has a limit of detection of 200 fM and a linear calibration curve (R

Indexed as

AnimalsBiological AssayCalibrationCattleCell Culture TechniquesChromatography, High Pressure LiquidDNA, Single-StrandedHumansLimit of DetectionMCF-7 CellsMicroRNAsNucleic Acid Amplification TechniquesDNA, Single-StrandedMicroRNAsAmplified fluorescence signalBiological samplesHPLC quantificationLow background detectionmicroRNAsPolyadenylation

Identifiers

PMID31987149
PMCPMC6989635
OpenAlexW2992667315

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.