Evidence map›Paper›PMID 31983024›Full record

ArticleJournal of applied genetics2020

Novel and recurrent variants of ATP2C1 identified in patients with Hailey-Hailey disease.

J Sawicka, A Kutkowska-Kaźmierczak, K Woźniak, A Tysarowski, K Osipowicz, J Poznański, A M Rygiel, N Braun-Walicka, K Niepokój, J Bal and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of applied genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

J SawickaMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland.
A Kutkowska-KaźmierczakMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland.
K WoźniakDepartment of Dermatology and Immunodermatology, Medical University of Warsaw, Koszykowa 82A, 00-001, Warsaw, PL, Poland.
A TysarowskiTranslational and Molecular Oncology Department, Maria Sklodowska-Curie Memorial Cancer Center and Institute of Oncology, W. K. Roentgena 5, 02-781, Warsaw, PL, Poland.
K OsipowiczDepartment of Dermatology and Immunodermatology, Medical University of Warsaw, Koszykowa 82A, 00-001, Warsaw, PL, Poland.
J PoznańskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5A, 02-106, Warsaw, PL, Poland.
A M RygielMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland.
N Braun-WalickaMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland.
K NiepokójMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland.
J BalMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland.
C KowalewskiDepartment of Dermatology and Immunodermatology, Medical University of Warsaw, Koszykowa 82A, 00-001, Warsaw, PL, Poland.
K Wertheim-TysarowskaMedical Genetics Department, Institute of Mother and Child, Kasprzaka 17a, 01-211, Warsaw, PL, Poland. katarzyna.wertheim@imid.med.pl.ORCID http://orcid.org/0000-0001-9911-3811
Medical University of Warsaw · PLInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLMother and Child Foundation · GBThe Maria Sklodowska-Curie National Research Institute of Oncology · PL

Funding

Narodowe Centrum Nauki 2014/13/D/NZ5/03304
6 · The paper itself

Abstract

Hailey-Hailey disease (HHD) is a rare, late-onset autosomal dominant genodermatosis characterized by blisters, vesicular lesions, crusted erosions, and erythematous scaly plaques predominantly in intertriginous regions. HHD is caused by ATP2C1 mutations. About 180 distinct mutations have been identified so far; however, data of only few cases from Central Europe are available. The aim was to analyze the ATP2C1 gene in a cohort of Polish HHD patients. A group of 18 patients was enrolled in the study based on specific clinical symptoms. Mutations were detected using Sanger or next generation sequencing. In silico analysis was performed by prediction algorisms and dynamic structural modeling. In two cases, mRNA analysis was performed to confirm aberrant splicing. We detected 13 different mutations, including 8 novel, 2 recurrent (p.Gly850Ter and c.325-3 T > G), and 6 sporadic (c.423-1G > T, c.899 + 1G > A, p.Leu539Pro, p.Thr808TyrfsTer16, p.Gln855Arg and a complex allele: c.[1610C > G;1741 + 3A > G]). In silico analysis shows that all novel missense variants are pathogenic or likely pathogenic. We confirmed pathogenic status for two novel variants c.325-3 T > G and c.[1610C > G;1741 + 3A > G] by mRNA analysis. Our results broaden the knowledge about genetic heterogeneity in Central European patients with ATP2C1 mutations and also give further evidence that careful and multifactorial evaluation of variant pathogenicity status is essential.

Indexed as

AdolescentAdultCalcium-Transporting ATPasesComputer SimulationFemaleHumansMaleMutationPedigreePemphigus, Benign FamilialPolandSkin DiseasesStructure-Activity RelationshipYoung AdultATP2C1 protein, humanCalcium-Transporting ATPasesATP2C1GenodermatosisHailey-Hailey disease

Identifiers

PMID31983024
PMCPMC7148260
OpenAlexW3001672671

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.