Evidence map›Paper›PMID 31982408›Full record

ArticleAnalytical biochemistry2020

Nicotinamide phosphoribosyltransferase purification using SUMO expression system.

Trivikram R Molugu, Radu C Oita, Udeep Chawla, Sara M Camp, Michael F Brown, Joe G N Garcia

Open access · greenAbstract read
In one paragraph

Article in Analytical biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  3. Article
  4. Observational
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Trivikram R MoluguDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ, 85721, USA.
Radu C OitaDepartment of Medicine, University of Arizona Health Sciences, University of Arizona, Tucson, AZ, 85721, USA.
Udeep ChawlaDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ, 85721, USA.
Sara M CampDepartment of Medicine, University of Arizona Health Sciences, University of Arizona, Tucson, AZ, 85721, USA.
Michael F BrownDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ, 85721, USA; Department of Physics, University of Arizona, Tucson, AZ, 85721, USA. Electronic address: mfbrown@u.arizona.edu.
Joe G N GarciaDepartment of Medicine, University of Arizona Health Sciences, University of Arizona, Tucson, AZ, 85721, USA. Electronic address: skipgarcia@email.arizona.edu.
University of Arizona · US

Funding

Structure-Function Analysis of nmMLCK in EC Barrier ResponsesP01HL126609 · NHLBI · UNIVERSITY OF FLORIDA · PI Joe G. N. Garcia · 2016 to 2026
$24.4M
Novel Involvement of NAMPT and TLR4 in PAH Vascular RemodelingR01HL141387 · NHLBI · UNIVERSITY OF FLORIDA · PI Joe G. N. Garcia, Ayako Makino · 2019 to 2026
$3.8M
MEMBRANE BASIS OF VISUAL EXCITATIONR01EY012049 · NEI · UNIVERSITY OF ARIZONA · PI BROWN, MICHAEL F · 1998 to 2012
$3.3M
Pathogenic Mechanisms of PBEF in Ventilator Induced Lung InjuryR01HL094394 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GARCIA, JOE G. N. · 2009 to 2012
$1.6M
MEMBRANE BASIS OF VISUAL EXCITATIONR01EY026041 · NEI · UNIVERSITY OF ARIZONA · PI BROWN, MICHAEL F · 2016 to 2018
$1.1M
NEI NIH HHS R01 EY012049NEI NIH HHS R01 EY026041NHLBI NIH HHS P01 HL126609NHLBI NIH HHS R01 HL094394NHLBI NIH HHS R01 HL141387
6 · The paper itself

Abstract

Nicotinamide phosphoribosyltransferase (NAMPT) is a rate-limiting enzyme in the salvage pathway required for nicotinamide adenine dinucleotide synthesis. The secreted NAMPT protein serves as a master regulatory cytokine involved in activation of evolutionarily conserved inflammatory networks. Appreciation of the role of NAMPT as a damage-associated molecular pattern protein (DAMP) has linked its activities to several disorders via Toll-like receptor 4 (TLR4) binding and inflammatory cascade activation. Information is currently lacking concerning the precise mode of the NAMPT protein functionality due to limited availability of purified protein for use in in vitro and in vivo studies. Here we report successful NAMPT expression using the pET-SUMO expression vector in E. coli strain SHuffle containing a hexa-His tag for purification. The Ulp1 protease was used to cleave the SUMO and hexa-His tags, and the protein was purified by immobilized-metal affinity chromatography. The protein yield was ~4 mg/L and initial biophysical characterization of the protein using circular dichroism revealed the secondary structural elements, while dynamic light scattering demonstrated the presence of oligomeric units. The NAMPT-SUMO showed a predominantly dimeric protein with functional enzymatic activity. Finally, we report NAMPT solubilization in n-dodecyl-β-d-maltopyranoside (DDM) detergent in monomeric form, thus enhancing the opportunity for further structural and functional investigations.

Indexed as

CytokinesHumansModels, MolecularMolecular StructureNADNicotinamide PhosphoribosyltransferaseCytokinesNADNicotinamide Phosphoribosyltransferasenicotinamide phosphoribosyltransferase, humanBiophysical characterizationCircular dichroismDynamic light scatteringLigation-independent cloningNAMPT purificationSUMO fusion tag

Identifiers

PMID31982408
PMCPMC7735423
OpenAlexW3002534501

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.