Evidence map›Paper›PMID 31980690›Full record

ArticleScientific reports2020

Multi-omics characterization of a diet-induced obese model of non-alcoholic steatohepatitis.

Helene M Ægidius, Sanne S Veidal, Michael Feigh, Philip Hallenborg, Michele Puglia, Tune H Pers, Niels Vrang, Jacob Jelsing, Birgitte R Kornum, Blagoy Blagoev and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 54 citations in OpenAlex.

  1. Lack of GPNMB Is Associated With Altered Lipid and Glucose Metabolism and Disrupted Diurnal Hepatic Glycogen Regulation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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  7. Hepatic CB1 receptor signaling triggers GMetabolism: clinical and experimental · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Helene M ÆgidiusGubra, Hørsholm Kongevej 11B, Hørsholm, Denmark.
Sanne S VeidalGubra, Hørsholm Kongevej 11B, Hørsholm, Denmark.
Michael FeighGubra, Hørsholm Kongevej 11B, Hørsholm, Denmark.
Philip HallenborgDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.
Michele PugliaDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.
Tune H PersNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.
Niels VrangGubra, Hørsholm Kongevej 11B, Hørsholm, Denmark.
Jacob JelsingGubra, Hørsholm Kongevej 11B, Hørsholm, Denmark.
Birgitte R KornumDepartment of Neuroscience, University of Copenhagen, Copenhagen, Denmark.
Blagoy BlagoevDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.
Kristoffer T G RigboltGubra, Hørsholm Kongevej 11B, Hørsholm, Denmark. kri@gubra.dk.
Gubra (Denmark) · DKUniversity of Southern Denmark · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To improve the understanding of the complex biological processes underlying the development of non-alcoholic steatohepatitis (NASH), a multi-omics approach combining bulk RNA-sequencing based transcriptomics, quantitative proteomics and single-cell RNA-sequencing was used to characterize tissue biopsies from histologically validated diet-induced obese (DIO) NASH mice compared to chow-fed controls. Bulk RNA-sequencing and proteomics showed a clear distinction between phenotypes and a good correspondence between mRNA and protein level regulations, apart from specific regulatory events discovered by each technology. Transcriptomics-based gene set enrichment analysis revealed changes associated with key clinical manifestations of NASH, including impaired lipid metabolism, increased extracellular matrix formation/remodeling and pro-inflammatory responses, whereas proteomics-based gene set enrichment analysis pinpointed metabolic pathway perturbations. Integration with single-cell RNA-sequencing data identified key regulated cell types involved in development of NASH demonstrating the cellular heterogeneity and complexity of NASH pathogenesis.

Indexed as

TranscriptomeAnimalsChromatography, LiquidDiet, High-FatDisease Models, AnimalLiverMaleMiceMice, Inbred C57BLNon-alcoholic Fatty Liver DiseaseObesityProteomicsRNASequence AlignmentSequence Analysis, RNASingle-Cell AnalysisRNA

Identifiers

PMID31980690
PMCPMC6981216
OpenAlexW3002152478

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.