Evidence map›Paper›PMID 31980652›Full record

ArticleScientific reports2020

Autofluorescence mediated red spherulocyte sorting provides insights into the source of spinochromes in sea urchins.

Jonathan Hira, Deanna Wolfson, Aaron John Christian Andersen, Tor Haug, Klara Stensvåg

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Coelomocyte populations in the sea urchin,Frontiers in immunology · 2022
    Article
  7. Article
  8. The Diverse Transformer (Trf) Protein Family in the Sea UrchinInternational journal of molecular sciences · 2021
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jonathan HiraThe Norwegian College of Fishery Science, The Faculty of Biosciences, Fisheries and Economics, UiT The Arctic University of Norway, Tromsø, Norway. jonathan.hira@uit.no.
Deanna WolfsonDepartment of Physics and Technology, The Faculty of Science and Technology, UiT The Arctic University of Norway, Tromsø, Norway.ORCID http://orcid.org/0000-0001-6059-2472
Aaron John Christian AndersenThe Norwegian College of Fishery Science, The Faculty of Biosciences, Fisheries and Economics, UiT The Arctic University of Norway, Tromsø, Norway.ORCID http://orcid.org/0000-0002-3876-7480
Tor HaugThe Norwegian College of Fishery Science, The Faculty of Biosciences, Fisheries and Economics, UiT The Arctic University of Norway, Tromsø, Norway.
Klara StensvågThe Norwegian College of Fishery Science, The Faculty of Biosciences, Fisheries and Economics, UiT The Arctic University of Norway, Tromsø, Norway. klara.stensvag@uit.no.ORCID http://orcid.org/0000-0002-4717-6711
UiT The Arctic University of Norway · NODirectorate of Fisheries · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Red spherule cells (RSCs) are considered one of the prime immune cells of sea urchins, but their detailed biological role during immune responses is not well elucidated. Lack of pure populations accounts for one of the major challenges of studying these cells. In this study, we have demonstrated that live RSCs exhibit strong, multi-colour autofluorescence distinct from other coelomocytes, and with the help of fluorescence-activated cell sorting (FACS), a pure population of live RSCs was successfully separated from other coelomocytes in the green sea urchin, Strongylocentrotus droebachiensis. This newly developed RSCs isolation method has allowed profiling of the naphthoquinone content in these cells. With the use of ultra high-performance liquid chromatography, UV absorption spectra, and high-resolution tandem mass spectrometry, it was possible to identify sulphated derivatives of spinochrome C, D, E and spinochrome dimers, which suggests that the RSCs may play an important biological role in the biogenesis of naphthoquinone compounds and regulating their bioactivity.

Indexed as

AnimalsAnimal StructuresCell SeparationChromatography, High Pressure LiquidCytoplasmic GranulesFlow CytometryMicroscopy, FluorescenceNaphthoquinonesOptical ImagingSpectrophotometry, UltravioletStrongylocentrotusTandem Mass SpectrometryTime-Lapse ImagingNaphthoquinonesspinochrome A

Identifiers

PMID31980652
PMCPMC6981155
OpenAlexW3002958604

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.