Evidence map›Paper›PMID 31980634›Full record

ArticleNature communications2020

Erythroid differentiation regulator-1 induced by microbiota in early life drives intestinal stem cell proliferation and regeneration.

Hirohito Abo, Benoit Chassaing, Akihito Harusato, Miguel Quiros, Jennifer C Brazil, Vu L Ngo, Emilie Viennois, Didier Merlin, Andrew T Gewirtz, Asma Nusrat and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 59 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Hirohito AboCenter for Inflammation, Immunity & Infection, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Ave, Atlanta, GA, 30303, USA.
Benoit ChassaingCenter for Inflammation, Immunity & Infection, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Ave, Atlanta, GA, 30303, USA.ORCID http://orcid.org/0000-0002-4285-769X
Akihito HarusatoCenter for Inflammation, Immunity & Infection, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Ave, Atlanta, GA, 30303, USA.ORCID http://orcid.org/0000-0001-9204-1819
Miguel QuirosDepartment of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Jennifer C BrazilDepartment of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Vu L NgoCenter for Inflammation, Immunity & Infection, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Ave, Atlanta, GA, 30303, USA.
Emilie ViennoisCenter for Diagnostics and Therapeutics, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, 30303, USA.
Didier MerlinCenter for Diagnostics and Therapeutics, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, 30303, USA.
Andrew T GewirtzCenter for Inflammation, Immunity & Infection, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Ave, Atlanta, GA, 30303, USA.
Asma NusratDepartment of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Timothy L DenningCenter for Inflammation, Immunity & Infection, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Ave, Atlanta, GA, 30303, USA. tdenning@gsu.edu.
Georgia State University · USUniversity of Michigan · USInserm · FR

Funding

Intestinal Mucosal Wound Resealing in IBDR01DK055679 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ASMA NUSRAT · 2004 to 2026
$8.1M
NIDDK NIH HHS R01 DK055679
6 · The paper itself

Abstract

Gut microbiota and their metabolites are instrumental in regulating intestinal homeostasis. However, early-life microbiota associated influences on intestinal development remain incompletely understood. Here we demonstrate that co-housing of germ-free (GF) mice with specific-pathogen free (SPF) mice at weaning (exGF) results in altered intestinal gene expression. Our results reveal that one highly differentially expressed gene, erythroid differentiation regulator-1 (Erdr1), is induced during development in SPF but not GF or exGF mice and localizes to Lgr5

Indexed as

MicrobiotaRegenerationAnimalsCell ProliferationColitisDextran SulfateEpithelial CellsGene Expression RegulationGerm-Free LifeHumansLuciferasesMembrane ProteinsMice, Inbred C57BLOrganoidsReceptors, G-Protein-CoupledStem CellsDextran Sulfateerythroid differentiation regulator 1, mouseLgr5 protein, mouseLuciferasesMembrane ProteinsReceptors, G-Protein-CoupledTumor Suppressor Proteins

Identifiers

PMID31980634
PMCPMC6981263
OpenAlexW3000799236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.