Evidence map›Paper›PMID 31979421›Full record

ArticleInternational journal of molecular sciences2020

The SWI/SNF ATP-Dependent Chromatin Remodeling Complex in Arabidopsis Responds to Environmental Changes in Temperature-Dependent Manner.

Dominika M Gratkowska-Zmuda, Szymon Kubala, Elzbieta Sarnowska, Pawel Cwiek, Paulina Oksinska, Jaroslaw Steciuk, Anna T Rolicka, Magdalena Zaborowska, Ernest Bucior, Anna Maassen and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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  11. Chromatin, Epigenetics and Plant Physiology.International journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Dominika M Gratkowska-ZmudaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Szymon KubalaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Elzbieta SarnowskaMaria Sklodowska-Curie Cancer Center Institute of Oncology, 02-781 Warsaw, Poland.
Pawel CwiekInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Paulina OksinskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Jaroslaw SteciukInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Anna T RolickaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Magdalena ZaborowskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Ernest BuciorInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Anna MaassenInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Rainer FranzenMax-Planck Institut für Pflanzenzüchtungsforschung, 50829 Köln, Germany.
Csaba KonczMax-Planck Institut für Pflanzenzüchtungsforschung, 50829 Köln, Germany.
Tomasz J SarnowskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLHUN-REN Szegedi Biológiai Kutatóközpont · HUMax Planck Institute for Plant Breeding Research · DEThe Maria Sklodowska-Curie National Research Institute of Oncology · PL

Funding

Ministerstwo Nauki i Szkolnictwa Wyższego 466/STYP/11/2016 to SKMinisterstwo Nauki i Szkolnictwa Wyższego Diamond grant No DI 2011 0269 41 to DMGZNarodowe Centrum Nauki UMO-2011/01/N/NZ1/01525 to ATRNarodowe Centrum Nauki UMO-2011/01/N/NZ1/01530 to EBNarodowe Centrum Nauki UMO-2014/13/B/NZ2/01187 to TJSNarodowe Centrum Nauki UMO-2017/01/X/NZ2/00282 to AM
6 · The paper itself

Abstract

SWI/SNF ATP-dependent chromatin remodeling complexes (CRCs) play important roles in the regulation of transcription, cell cycle, DNA replication, repair, and hormone signaling in eukaryotes. The core of SWI/SNF CRCs composed of a SWI2/SNF2 type ATPase, a SNF5 and two of SWI3 subunits is sufficient for execution of nucleosome remodeling in vitro. The Arabidopsis genome encodes four SWI2/SNF2 ATPases, four SWI3, a single SNF5 and two SWP73 subunits. Genes of the core SWI/SNF components have critical but not fully overlapping roles during plant growth, embryogenesis, and sporophyte development. Here we show that the Arabidopsis

Indexed as

5' Untranslated RegionsAdaptation, PhysiologicalAdenosine TriphosphateArabidopsisArabidopsis ProteinsChromatinChromatin Assembly and DisassemblyChromatin ImmunoprecipitationChromosomal Proteins, Non-HistoneCold TemperatureGene Expression Regulation, PlantMutationNucleosomesPhenotypePlants, Genetically ModifiedProtein Serine-Threonine Kinases5' Untranslated RegionsAdenosine TriphosphateArabidopsis ProteinsCBF1 protein, ArabidopsisChromatinChromosomal Proteins, Non-HistoneICE1 protein, ArabidopsisMyb15 protein, ArabidopsisNucleosomesProtein Serine-Threonine KinasesSNF1-related protein kinasesSWI3C protein, ArabidopsisTrans-ActivatorsTranscription FactorsATP-dependent chromatin remodelingcold responseSWI3CSWI/SNFtranscriptional control of gene expression

Identifiers

PMID31979421
PMCPMC7037086
OpenAlexW3000920934

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.