Evidence map›Paper›PMID 31978676›Full record

ArticleRedox biology2020

Effect of ER stress on sphingolipid levels and apoptotic pathways in retinal pigment epithelial cells.

Ebru Afşar, Esma Kırımlıoglu, Tuğçe Çeker, Çağatay Yılmaz, Necdet Demir, Mutay Aslan

Open access · goldAbstract read
In one paragraph

Article in Redox biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  4. Review
  5. QMRInternational journal of molecular sciences · 2025
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  7. Biomolecules · 2025
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  9. Effects of aurantiamide on a rat model of renovascular arterial hypertension.Pflugers Archiv : European journal of physiology · 2023
    Article
  10. Article
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  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ebru AfşarDepartment of Medical Biochemistry, Akdeniz University Faculty of Medicine, Antalya, Turkey. Electronic address: ebrukiracc@gmail.com.
Esma KırımlıogluDepartment of Histology, Akdeniz University Faculty of Medicine, Antalya, Turkey. Electronic address: esma.konuk@gmail.com.
Tuğçe ÇekerDepartment of Medical Biochemistry, Akdeniz University Faculty of Medicine, Antalya, Turkey. Electronic address: tugceker159@gmail.com.
Çağatay YılmazDepartment of Medical Biochemistry, Akdeniz University Faculty of Medicine, Antalya, Turkey. Electronic address: ccagatayyilmaz@gmail.com.
Necdet DemirDepartment of Histology, Akdeniz University Faculty of Medicine, Antalya, Turkey. Electronic address: necdet.demir@gmail.com.
Mutay AslanDepartment of Medical Biochemistry, Akdeniz University Faculty of Medicine, Antalya, Turkey. Electronic address: mutayaslan@akdeniz.edu.tr.
Akdeniz University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe aimed to determine sphingolipid levels and examine apoptotic pathways in human retinal pigment epithelial cells (ARPE-19) undergoing endoplasmic reticulum (ER) stress.

methodsCells were treated with tunicamycin (TM) to induce ER stress and tauroursodeoxycholic acid (TUDCA), an ER stress inhibitor, was administered to decrease cytotoxicity. Cell viability was measured by MTT assay. Levels of C16-C24 sphingomyelins (SM) and C16-C24 ceramides (CERs) were determined by LC-MS/MS. Glucose-regulated protein 78-kd (GRP78) and nuclear factor kappa-b subunit 1 (NFκB1) gene expressions were evaluated by quantitative PCR analysis, while GRP 78, NF-κB p65, cleaved caspase-3 and caspase-12 protein levels were assesed by immunofluorescence. Ceramide-1-phosphate (C1P) levels were determined by immunoassay, while caspase -3 and -12 activity in cell lysates were measured via a fluorometric method.

resultsInduction of ER stress in TM treated groups were confirmed by significantly increased mRNA and protein levels of GRP78. TM significantly decreased cell viability compared to controls. Treatment with TUDCA along with TM significantly increased cell viability compared to the TM group. A significant increase was observed in C22-C24 CERs, C1P, caspase-3, caspase-12, NFκB1 mRNA and NF-κB p65 protein levels in cells treated with TM compared to controls. Administration of TUDCA lead to a partial decrease in GRP78 expression, NFκB1 mRNA, NF-κB p65 protein, C22-C24 CERs and C1P levels along with a decrease in caspase-3 and -12 activity.

conclusionsThe results of this study reveal the presence of increased long chain CERs, C1P and apoptotic markers in retinal cells undergoing ER stress.

Indexed as

ApoptosisCell LineCeramidesChromatography, LiquidEndoplasmic Reticulum Chaperone BiPEndoplasmic Reticulum StressGene Expression RegulationHeat-Shock ProteinsHumansNF-kappa B p50 SubunitRetinal Pigment EpitheliumSignal TransductionSphingolipidsSphingomyelinsTandem Mass SpectrometryTaurochenodeoxycholic AcidCeramidesEndoplasmic Reticulum Chaperone BiPHeat-Shock ProteinsHSPA5 protein, humanNF-kappa B p50 SubunitNFKB1 protein, humanSphingolipidsSphingomyelinsTaurochenodeoxycholic AcidTunicamycinursodoxicoltaurineRetinal pigment epithelial cellsSphingolipidTunicamycin

Identifiers

PMID31978676
PMCPMC6976939
OpenAlexW3000004718

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.