Evidence map›Paper›PMID 31978390›Full record

ArticleToxicology and applied pharmacology2020

Comparative analysis of lung and blood transcriptomes in mice exposed to multi-walled carbon nanotubes.

Timur O Khaliullin, Naveena Yanamala, Mackenzie S Newman, Elena R Kisin, Liliya M Fatkhutdinova, Anna A Shvedova

Open access · greenAbstract readComparative Study
In one paragraph

Article in Toxicology and applied pharmacology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. LILRB4, from the immune system to the disease target.American journal of translational research · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Timur O KhaliullinDepartment of Physiology and Pharmacology, West Virginia University, Morgantown, WV, USA; Health Effects Laboratory Division, NIOSH, CDC, Morgantown, WV, USA. Electronic address: ved2@cdc.gov.
Naveena YanamalaHealth Effects Laboratory Division, NIOSH, CDC, Morgantown, WV, USA. Electronic address: wqu1@cdc.gov.
Mackenzie S NewmanDepartment of Physiology and Pharmacology, West Virginia University, Morgantown, WV, USA. Electronic address: msnewman@mix.wvu.edu.
Elena R KisinHealth Effects Laboratory Division, NIOSH, CDC, Morgantown, WV, USA. Electronic address: edk8@cdc.gov.
Liliya M FatkhutdinovaDepartment of Hygiene and Occupational Medicine, Kazan State Medical University, Kazan, Russia.
Anna A ShvedovaDepartment of Physiology and Pharmacology, West Virginia University, Morgantown, WV, USA; Health Effects Laboratory Division, NIOSH, CDC, Morgantown, WV, USA. Electronic address: ats1@cdc.gov.
National Institute for Occupational Safety and Health · USKazan State Medical University · RUWest Virginia University · US

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

Pulmonary exposure to multi-walled carbon nanotubes (MWCNT) causes inflammation, fibroproliferation, immunotoxicity, and systemic responses in rodents. However, the search for representative biomarkers of exposure is an ongoing endeavor. Whole blood gene expression profiling is a promising new approach for the identification of novel disease biomarkers. We asked if the whole blood transcriptome reflects pathology-specific changes in lung gene expression caused by MWCNT. To answer this question, we performed mRNA sequencing analysis of the whole blood and lung in mice administered MWCNT or vehicle solution via pharyngeal aspiration and sacrificed 56 days later. The pattern of lung mRNA expression as determined using Ingenuity Pathway Analysis (IPA) was indicative of continued inflammation, immune cell trafficking, phagocytosis, and adaptive immune responses. Simultaneously, innate immunity-related transcripts (Plunc, Bpifb1, Reg3g) and cancer-related pathways were downregulated. IPA analysis of the differentially expressed genes in the whole blood suggested increased hematopoiesis, predicted activation of cancer/tumor development pathways, and atopy. There were several common upregulated genes between whole blood and lungs, important for adaptive immune responses: Cxcr1, Cd72, Sharpin, and Slc11a1. Trim24, important for T

Indexed as

AnimalsBiomarkersFemaleLungMiceMice, Inbred C57BLNanotubes, CarbonRNA, MessengerTranscriptomeBiomarkersNanotubes, CarbonRNA, MessengerIPA AnalysisLung TranscriptomeMWCNTWhole Blood Transcriptome

Identifiers

PMID31978390
PMCPMC7737661
OpenAlexW3002583065

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.