Evidence map›Paper›PMID 31978074›Full record

ArticlePloS one2020

Accelerated brain aging towards transcriptional inversion in a zebrafish model of the K115fs mutation of human PSEN2.

Nhi Hin, Morgan Newman, Jan Kaslin, Alon M Douek, Amanda Lumsden, Seyed Hani Moussavi Nik, Yang Dong, Xin-Fu Zhou, Noralyn B Mañucat-Tan, Alastair Ludington and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Sex-stratified genome-wide meta-analysis identifies novel loci for cognitive decline in older adults.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Pooled it
  2. Review
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  5. The curious case of a heterozygous loss-of-functionMolecular neurodegeneration advances · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Nhi HinBioinformatics Hub, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.ORCID 0000-0003-3063-4058
Morgan NewmanAlzheimer's Disease Genetics Laboratory, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.ORCID 0000-0002-4930-4529
Jan KaslinAustralian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia.
Alon M DouekAustralian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia.ORCID 0000-0001-5739-3835
Amanda LumsdenCollege of Medicine and Public Health, and Centre for Neuroscience, Flinders University, Adelaide, South Australia, Australia.
Seyed Hani Moussavi NikBioinformatics Hub, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
Yang DongBioinformatics Hub, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.ORCID 0000-0002-4810-2730
Xin-Fu ZhouSchool of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia, Australia.
Noralyn B Mañucat-TanSchool of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia, Australia.
Alastair LudingtonBioinformatics Hub, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
David L AdelsonCentre for Bioinformatics and Computational Genetics, School of Bioogical Sciences, Adelaide, South Australia, Australia.ORCID 0000-0003-2404-5636
Stephen PedersonBioinformatics Hub, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
Michael LardelliAlzheimer's Disease Genetics Laboratory, School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
The University of Adelaide · AUAustralian Regenerative Medicine Institute · AUUniversity of South Australia · AUCentre for Cancer Biology · AUFlinders University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe molecular changes involved in Alzheimer's disease (AD) progression remain unclear since we cannot easily access antemortem human brains. Some non-mammalian vertebrates such as the zebrafish preserve AD-relevant transcript isoforms of the PRESENILIN genes lost from mice and rats. One example is PS2V, the alternative transcript isoform of the PSEN2 gene. PS2V is induced by hypoxia/oxidative stress and shows increased expression in late onset, sporadic AD brains. A unique, early onset familial AD mutation of PSEN2, K115fs, mimics the PS2V coding sequence suggesting that forced, early expression of PS2V-like isoforms may contribute to AD pathogenesis. Here we use zebrafish to model the K115fs mutation to investigate the effects of forced PS2V-like expression on the transcriptomes of young adult and aged adult brains.

methodsWe edited the zebrafish genome to model the K115fs mutation. To explore its effects at the molecular level, we analysed the brain transcriptome and proteome of young (6-month-old) and aged (24-month-old) wild type and heterozygous mutant female sibling zebrafish. Finally, we used gene co-expression network analysis (WGCNA) to compare molecular changes in the brains of these fish to human AD.

resultsYoung heterozygous mutant fish show transcriptional changes suggesting accelerated brain aging and increased glucocorticoid signalling. These early changes precede a transcriptional 'inversion' that leads to glucocorticoid resistance and other likely pathological changes in aged heterozygous mutant fish. Notably, microglia-associated immune responses regulated by the ETS transcription factor family are altered in both our zebrafish mutant model and in human AD. The molecular changes we observe in aged heterozygous mutant fish occur without obvious histopathology and possibly in the absence of Aβ.

conclusionsOur results suggest that forced expression of a PS2V-like isoform contributes to immune and stress responses favouring AD pathogenesis. This highlights the value of our zebrafish genetic model for exploring molecular mechanisms involved in AD pathogenesis.

Indexed as

Gene Regulatory NetworksAgingAlternative SplicingAlzheimer DiseaseAnimalsAnimals, Genetically ModifiedBrainDatasets as TopicDisease Models, AnimalDown-RegulationFemaleFrameshift MutationGene EditingHeterozygoteHumansMicrogliaPresenilin-1Presenilin-2Protein IsoformsPsen1 protein, zebrafishPSEN2 protein, humanZebrafish Proteins

Identifiers

PMID31978074
PMCPMC6980398
OpenAlexW3002551330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.