Evidence map›Paper›PMID 31974348›Full record

ArticleNature communications2020

The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly.

Mark Pinese, Paul Lacaze, Emma M Rath, Andrew Stone, Marie-Jo Brion, Adam Ameur, Sini Nagpal, Clare Puttick, Shane Husson, Dmitry Degrave and 28 more

Abstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Article
  2. Integrated Germline and Somatic Molecular Profiling to Detect Cancer Predisposition Has a High Clinical Impact in Poor-Prognosis Pediatric Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Mark Pinese *Garvan Institute of Medical Research, Sydney, NSW, Australia.
Paul Lacaze *Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0002-0902-6798
Emma M RathGarvan Institute of Medical Research, Sydney, NSW, Australia.ORCID http://orcid.org/0000-0002-8430-5236
Andrew StoneGarvan Institute of Medical Research, Sydney, NSW, Australia.
Marie-Jo BrionGarvan Institute of Medical Research, Sydney, NSW, Australia.
Adam AmeurDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0001-6085-6749
Sini NagpalCenter for Integrative Genomics, Georgia Institute of Technology, Atlanta, GA, USA.
Clare PuttickGarvan Institute of Medical Research, Sydney, NSW, Australia.
Shane HussonGarvan Institute of Medical Research, Sydney, NSW, Australia.
Dmitry DegraveGarvan Institute of Medical Research, Sydney, NSW, Australia.
Tina Navin CristinaSax Institute, Sydney, NSW, Australia.
Vivian F S KahlChildren's Medical Research Institute, Faculty of Medicine and Health, University of Sydney, Westmead, NSW, Australia.
Aaron L StathamGarvan Institute of Medical Research, Sydney, NSW, Australia.
Robyn L WoodsDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
John J McNeilDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0002-1049-5129
Moeen RiazDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
Margo BarrCentre for Primary Health Care and Equity, University of New South Wales, Sydney, NSW, Australia.
Mark R NelsonDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
Christopher M ReidDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
Anne M MurrayBerman Center for Outcomes and Clinical Research, Hennepin Healthcare Research Institute, Hennepin Healthcare, Minneapolis, MN, USA.
Raj C ShahDepartment of Family Medicine and Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA.
Rory WolfeDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
Joshua R AtkinsSchool of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.ORCID http://orcid.org/0000-0003-0821-1112
Chantel FitzsimmonsSchool of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.
Heath M CairnsSchool of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.
Melissa J GreenSchool of Psychiatry, University of New South Wales, Sydney, NSW, Australia.
Vaughan J CarrSchool of Psychiatry, University of New South Wales, Sydney, NSW, Australia.
Mark J CowleyGarvan Institute of Medical Research, Sydney, NSW, Australia.
Hilda A PickettChildren's Medical Research Institute, Faculty of Medicine and Health, University of Sydney, Westmead, NSW, Australia.
Paul A JamesParkville Familial Cancer Centre, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0002-4361-4657
Joseph E PowellUNSW Cellular Genomics Futures Institute, School of Medical Sciences, University of New South Wales, Sydney, NSW, Australia.
Warren KaplanGarvan Institute of Medical Research, Sydney, NSW, Australia.
Greg GibsonCenter for Integrative Genomics, Georgia Institute of Technology, Atlanta, GA, USA.ORCID http://orcid.org/0000-0002-5352-5877
Ulf GyllenstenScience for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.
Murray J CairnsSchool of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.ORCID http://orcid.org/0000-0003-2490-2538
Martin McNamaraSax Institute, Sydney, NSW, Australia.
Marcel E Dinger *Garvan Institute of Medical Research, Sydney, NSW, Australia.ORCID http://orcid.org/0000-0003-4423-934X
David M Thomas *Garvan Institute of Medical Research, Sydney, NSW, Australia. d.thomas@garvan.org.au.ORCID http://orcid.org/0000-0002-2527-5428

Funding

ASPirin in Reducing Events in the ElderlyU01AG029824 · NIA · HENNEPIN HEALTHCARE RESEARCH INSTITUTE · PI MCNEIL, JOHN JAMES, MURRAY, ANNE M · 2009 to 2018
$64.6M
Main Administrative CoreU19AG062682 · NIA · HENNEPIN HEALTHCARE RESEARCH INSTITUTE · PI CHAN, ANDREW T, MCNEIL, JOHN JAMES · 2019 to 2023
$42.9M
Medical Research Council MC_PC_12028Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NIA NIH HHS U01 AG029824NIA NIH HHS U19 AG062682
6 · The paper itself

Abstract

Population health research is increasingly focused on the genetic determinants of healthy ageing, but there is no public resource of whole genome sequences and phenotype data from healthy elderly individuals. Here we describe the first release of the Medical Genome Reference Bank (MGRB), comprising whole genome sequence and phenotype of 2570 elderly Australians depleted for cancer, cardiovascular disease, and dementia. We analyse the MGRB for single-nucleotide, indel and structural variation in the nuclear and mitochondrial genomes. MGRB individuals have fewer disease-associated common and rare germline variants, relative to both cancer cases and the gnomAD and UK Biobank cohorts, consistent with risk depletion. Age-related somatic changes are correlated with grip strength in men, suggesting blood-derived whole genomes may also provide a biologic measure of age-related functional deterioration. The MGRB provides a broadly applicable reference cohort for clinical genetics and genomic association studies, and for understanding the genetics of healthy ageing.

Indexed as

Databases, GeneticGenetic VariationGenome, HumanAgedAged, 80 and overCohort StudiesFemaleGene FrequencyGenetic Predisposition to DiseaseHealthy VolunteersHumansMaleMiddle AgedMitochondriaNeoplasmsPhysical Functional Performance

Identifiers

PMID31974348
PMCPMC6978518

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.