ArticleBMC genomics2020
Genome-wide investigation of calcium-dependent protein kinase gene family in pineapple: evolution and expression profiles during development and stress.
Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- In Silico Characterisation and Determination of Gene Expression Levels of theInternational journal of molecular sciences · 2025Article
- Genome-wide identification, expression profile and selection analysis of the CPK gene family in Nelumbo nucifera.BMC genomics · 2025Article
- Arabidopsis Calcium Dependent Protein Kinase 3, and Its Orthologues OsCPK1, OsCPK15, and AcCPK16, Are Involved in Biotic and Abiotic Stresses.Plants (Basel, Switzerland) · 2025Article
- Advances in Protein Kinase Regulation of Stress Responses in Fruits and Vegetables.International journal of molecular sciences · 2025Review
- Calcium-dependent protein kinases as central hubs in plant abiotic stress signaling: mechanisms and prospects for crop improvement.Frontiers in plant science · 2025Review
- Nei 6 You 7075, a hybrid rice cultivar, exhibits enhanced disease resistance and drought tolerance traits.BMC plant biology · 2024Article
- Genome-wide analysis and prediction of chloroplast and mitochondrial RNA editing sites of AGC gene family in cotton (Gossypium hirsutum L.) for abiotic stress tolerance.BMC plant biology · 2024Article
- Surviving a Double-Edged Sword: Response of Horticultural Crops to Multiple Abiotic Stressors.International journal of molecular sciences · 2024Review
- Genome-Wide Identification and Characterization of CDPK Gene Family in Cultivated Peanut (Cells · 2023Article
- Genome-Wide Identification and Analysis of WRKY Gene Family inInternational journal of molecular sciences · 2023Article
- Whole-Genome Identification of Regulatory Function of CDPK Gene Families in Cold Stress Response forPlants (Basel, Switzerland) · 2023Article
- Genome-wide investigation of NLP gene family members in alfalfa (Medicago sativa L.): evolution and expression profiles during development and stress.BMC genomics · 2023Article
- Plant Disease Resistance-Related Signaling Pathways: Recent Progress and Future Prospects.International journal of molecular sciences · 2022Review
- Plant Responses to Herbivory, Wounding, and Infection.International journal of molecular sciences · 2022Review
- Genome-wide identification and expression analysis of the bZIP transcription factor family genes in response to abiotic stress in Nicotiana tabacum L.BMC genomics · 2022Article
- Identification ofInternational journal of molecular sciences · 2022Article
- The Potential of Molecular Indicators of Plant Virus Infection: Are Plants Able to Tell Us They Are Infected?Plants (Basel, Switzerland) · 2022Article
- In-depth analysis of large-scale screening of WRKY members based on genome-wide identification.Frontiers in genetics · 2022Article
- Genome-wide survey of Calcium-Dependent Protein Kinases (CPKs) in fiveFrontiers in plant science · 2022Article
- Delineating Calcium Signaling Machinery in Plants: Tapping the Potential through Functional Genomics.Current genomics · 2021Review
Corrections and comments
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Authors and funding
10 authors.
Funding
Abstract
backgroundCalcium-dependent protein kinase (CPK) is one of the main Ca
resultsHerein, we identified and characterized 17 AcoCPK genes from pineapple genome, which were unevenly distributed across eight chromosomes. Based on the gene structure and phylogenetic tree analyses, AcoCPKs were divided into four groups with conserved domain. Synteny analysis identified 7 segmental duplication events of AcoCPKs and 5 syntenic blocks of CPK genes between pineapple and Arabidopsis, and 8 between pineapple and rice. Expression pattern of different tissues and development stages suggested that several genes are involved in the functional development of plants. Different expression levels under various abiotic stresses also indicated that the CPK family underwent functional divergence during long-term evolution. AcoCPK1, AcoCPK3 and AcoCPK6, which were repressed by the abiotic stresses, were shown to be function in regulating pathogen resistance.
conclusions17 AcoCPK genes from pineapple genome were identified. Our analyses provide an important foundation for understanding the potential roles of AcoCPKs in regulating pineapple response to biotic and abiotic stresses.
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