Evidence map›Paper›PMID 31973116›Full record

ArticleNutrients2020

Aging and Caloric Restriction Modulate the DNA Methylation Profile of the Ribosomal RNA Locus in Human and Rat Liver.

Noémie Gensous, Francesco Ravaioli, Chiara Pirazzini, Roberto Gramignoli, Ewa Ellis, Gianluca Storci, Miriam Capri, Stephen Strom, Ezio Laconi, Claudio Franceschi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nutrients, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Genomic Instability and Epigenetic Changes during Aging.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Review
  8. Article
  9. Caloric restriction induced epigenetic effects on aging.Frontiers in cell and developmental biology · 2022
    Review
  10. Article
  11. Nucleolar stress: Friend or foe in cardiac function?Frontiers in cardiovascular medicine · 2022
    Review
  12. Review
  13. Article
  14. Environmental Exposures around Conception: Developmental Pathways Leading to Lifetime Disease Risk.International journal of environmental research and public health · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Noémie GensousDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, 40138 Bologna, Italy.
Francesco RavaioliDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, 40138 Bologna, Italy.
Chiara PirazziniIRCCS Istituto delle Scienze Neurologiche di Bologna, 40 139 Bologna, Italy.
Roberto GramignoliDepartment of Laboratory Medicine, Division of Pathology, Karolinska Institutet, 171 76 Stockholm, Sweden.
Ewa EllisDepartment of Clinical Science, Intervention and Technology (CLINTEC), Karolinska Institutet, 141-86, Stockholm, Sweden.
Gianluca StorciDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, 40138 Bologna, Italy.
Miriam CapriDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, 40138 Bologna, Italy.
Stephen StromDepartment of Laboratory Medicine, Karolinska Institute and Karolinska Universitetssjukhuset, 171 76, Stockholm, Sweden.
Ezio LaconiDepartment of Biomedical Sciences, University of Cagliari, 09 124 Cagliari, Italy.
Claudio FranceschiDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, 40138 Bologna, Italy.
Paolo GaragnaniDepartment of Experimental, Diagnostic and Specialty Medicine, Alma Mater Studiorum, 40138 Bologna, Italy.
Fabio MarongiuDepartment of Biomedical Sciences, University of Cagliari, 09 124 Cagliari, Italy.ORCID 0000-0001-5860-4227
Maria Giulia BacaliniIRCCS Istituto delle Scienze Neurologiche di Bologna, 40 139 Bologna, Italy.
Istituto delle Scienze Neurologiche di Bologna · ITKarolinska Institutet · SEKarolinska University Hospital · SEUniversity of Cagliari · IT

Funding

Associazione Italiana per la Ricerca sul Cancro 10604H2020 Marie Skłodowska-Curie Actions 675003Roberto and Cornelia Pallotti's Legacy for Cancer Research NASeventh Framework Programme 602757
6 · The paper itself

Abstract

A growing amount of evidence suggests that the downregulation of protein synthesis is an adaptive response during physiological aging, which positively contributes to longevity and can be modulated by nutritional interventions like caloric restriction (CR). The expression of ribosomal RNA (rRNA) is one of the main determinants of translational rate, and epigenetic modifications finely contribute to its regulation. Previous reports suggest that hypermethylation of ribosomal DNA (rDNA) locus occurs with aging, although with some species- and tissue- specificity. In the present study, we experimentally measured DNA methylation of three regions (the promoter, the 5' of the 18S and the 5' of 28S sequences) in the rDNA locus in liver tissues from rats at two, four, 10, and 18 months. We confirm previous findings, showing age-related hypermethylation, and describe, for the first time, that this gain in methylation also occurs in human hepatocytes. Furthermore, we show that age-related hypermethylation is enhanced in livers of rat upon CR at two and 10 months, and that at two months a trend towards the reduction of rRNA expression occurs. Collectively, our results suggest that CR modulates age-related regulation of methylation at the rDNA locus, thus providing an epigenetic readout of the pro-longevity effects of CR.

Indexed as

Caloric RestrictionAgingAnimalsDNA MethylationDNA, RibosomalEpigenesis, GeneticGenetic LociHumansLiverLongevityMalePromoter Regions, GeneticRatsRNA, RibosomalDNA, RibosomalRNA, Ribosomalagingcaloric restrictionDNA methylationliverribosomal RNA

Identifiers

PMID31973116
PMCPMC7070571
OpenAlexW3001556252

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.