Evidence map›Paper›PMID 31972611›Full record

ArticleClinical and translational gastroenterology2020

Oncomir MicroRNA-346 Is Upregulated in Colons of Patients With Primary Sclerosing Cholangitis.

Agnieszka Kempinska-Podhorodecka, Malgorzata Blatkiewicz, Ewa Wunsch, Lukasz Krupa, Krzysztof Gutkowski, Piotr Milkiewicz, Malgorzata Milkiewicz

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Agnieszka Kempinska-PodhorodeckaDepartment of Medical Biology, Pomeranian Medical University, Szczecin, Poland.
Malgorzata BlatkiewiczDepartment of Medical Biology, Pomeranian Medical University, Szczecin, Poland.
Ewa WunschTranslational Medicine Group, Pomeranian Medical University, Szczecin, Poland.
Lukasz KrupaDepartment of Gastroenterology, Teaching Hospital No 1, Rzeszow, Poland.
Krzysztof GutkowskiDepartment of Gastroenterology, Teaching Hospital No 1, Rzeszow, Poland.
Piotr MilkiewiczTranslational Medicine Group, Pomeranian Medical University, Szczecin, Poland.
Malgorzata MilkiewiczDepartment of Medical Biology, Pomeranian Medical University, Szczecin, Poland.
Pomeranian Medical University · PLRzeszów University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionPrimary sclerosing cholangitis (PSC) is a cholestatic liver disorder that is frequently associated with ulcerative colitis (UC). Patients with PSC and UC (PSC-UC) have a higher risk of colorectal neoplasia compared with patients with UC. The oncogenic properties of microRNA-346 (miR-346) have been recently reported. We investigated the expression of miR-346 and its 2 target genes, the receptor of vitamin D (VDR), and the tumor necrosis factor-α (TNF-α), which are known to modulate carcinogenesis.

methodsAscending and sigmoid colon biopsies were obtained from patients with PSC, PSC and UC (PSC-UC), UC, and healthy controls (n = 10 in each group). Expressions of VDR, TNF-α, 18S RNA, p27, miR-346, and reference microRNA, miR-191, were evaluated by real-time PCR using human TaqMan Gene Expression and TaqMan MicroRNA Assays. Functional studies with miR-346 mimic and inhibitor were conducted in HepG2 and Caco-2 cells. The effect of ursodeoxycholic acid on miR-346 expression was examined in Caco-2 cells.

resultsAn increased expression of miR-346 in the ascending colon of PSC-UC was observed (P < 0.001 vs all groups). In patients with UC, an exceptionally low colonic expression of miRNA-346 was accompanied by the extensive upregulation of VDR and TNF-α genes. A functional in vitro analysis demonstrated that inhibition of miR-346 resulted in the upregulation of VDR and TNF-α, whereas the induction of miR-346 activity suppressed VDR, TNF-α, and p27. DISCUSSION: The upregulation of miRNA-346 in the colon of patients with PSC may be responsible for the disturbance of VDR and TNF-α signaling pathway, which could result in an inadequate suppression of neoplasia.

Indexed as

AdultCaco-2 CellsCase-Control StudiesCholagogues and CholereticsCholangitis, SclerosingColitis, UlcerativeColonColon, AscendingColon, SigmoidColorectal NeoplasmsCyclin-Dependent Kinase Inhibitor p27FemaleGene Expression RegulationHep G2 CellsHumansMaleCholagogues and CholereticsCyclin-Dependent Kinase Inhibitor p27MicroRNAsMIRN346 microRNA, humanReceptors, CalcitriolRNA, Ribosomal, 18STNF protein, humanTumor Necrosis Factor-alphaUrsodeoxycholic AcidVDR protein, human

Identifiers

PMID31972611
PMCPMC7056054
OpenAlexW3000058667

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.