Evidence map›Paper›PMID 31971512›Full record

ArticleeLife2020

Hidden long-range memories of growth and cycle speed correlate cell cycles in lineage trees.

Erika E Kuchen, Nils B Becker, Nina Claudino, Thomas Höfer

Abstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Collective effects of cell cleavage dynamics.Frontiers in cell and developmental biology · 2024
    Review
  7. Machine learning enhanced cell tracking.Frontiers in bioinformatics · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Erika E Kuchen *Theoretical Systems Biology, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Nils B Becker *Theoretical Systems Biology, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-7490-6425
Nina ClaudinoTheoretical Systems Biology, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Thomas HöferTheoretical Systems Biology, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0003-3560-8780

Funding

Bundesministerium für Bildung und Forschung 01ZX1307Bundesministerium für Bildung und Forschung 0316076ABundesministerium für Bildung und Forschung 031L0087ASeventh Framework Programme FP7-HEALTH-2010 ASSET 259348
6 · The paper itself

Abstract

Cell heterogeneity may be caused by stochastic or deterministic effects. The inheritance of regulators through cell division is a key deterministic force, but identifying inheritance effects in a systematic manner has been challenging. Here, we measure and analyze cell cycles in deep lineage trees of human cancer cells and mouse embryonic stem cells and develop a statistical framework to infer underlying rules of inheritance. The observed long-range intra-generational correlations in cell-cycle duration, up to second cousins, seem paradoxical because ancestral correlations decay rapidly. However, this correlation pattern is naturally explained by the inheritance of both cell size and cell-cycle speed over several generations, provided that cell growth and division are coupled through a minimum-size checkpoint. This model correctly predicts the effects of inhibiting cell growth or cycle progression. In sum, we show how fluctuations of cell cycles across lineage trees help in understanding the coordination of cell growth and division.

Indexed as

Cell CycleCell ProliferationAnimalsHumansMiceMouse Embryonic Stem CellsTumor Cells, Culturedcell cyclecell growthcell lineagescellular memorycomputational biologyHidden-Markov modelhumanmousesize checkpointsystems biology

Identifiers

PMID31971512
PMCPMC7018508

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.