Evidence map›Paper›PMID 31971254›Full record

ArticleThe New phytologist2020

Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in Arabidopsis.

Ewa Mazur, Ivan Kulik, Jakub Hajný, Jiří Friml

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Slow and rapid auxin responses in Arabidopsis.Journal of experimental botany · 2024
    Article
  10. Article
  11. Genome Identification and Expression Profiling of theInternational journal of molecular sciences · 2024
    Article
  12. Role ofFrontiers in plant science · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Fourteen Stations of Auxin.Cold Spring Harbor perspectives in biology · 2022
    Review
  17. Review
  18. Article
  19. Structural Aspects of Auxin Signaling.Cold Spring Harbor perspectives in biology · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Ewa MazurUniversity of Silesia in Katowice, Faculty of Natural Sciences, Institute of Biology, Biotechnology and Environmental Protection, Katowice, Poland.ORCID 0000-0003-0252-1427
Ivan KulikInstitute of Science and Technology (IST), 3400, Klosterneuburg, Austria.ORCID 0000-0001-9033-1839
Jakub HajnýInstitute of Science and Technology (IST), 3400, Klosterneuburg, Austria.ORCID 0000-0003-2140-7195
Jiří FrimlInstitute of Science and Technology (IST), 3400, Klosterneuburg, Austria.ORCID 0000-0002-8302-7596
Institute of Science and Technology Austria · ATCentral European Institute of Technology · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant survival depends on vascular tissues, which originate in a self-organizing manner as strands of cells co-directionally transporting the plant hormone auxin. The latter phenomenon (also known as auxin canalization) is classically hypothesized to be regulated by auxin itself via the effect of this hormone on the polarity of its own intercellular transport. Correlative observations supported this concept, but molecular insights remain limited. In the current study, we established an experimental system based on the model Arabidopsis thaliana, which exhibits auxin transport channels and formation of vasculature strands in response to local auxin application. Our methodology permits the genetic analysis of auxin canalization under controllable experimental conditions. By utilizing this opportunity, we confirmed the dependence of auxin canalization on a PIN-dependent auxin transport and nuclear, TIR1/AFB-mediated auxin signaling. We also show that leaf venation and auxin-mediated PIN repolarization in the root require TIR1/AFB signaling. Further studies based on this experimental system are likely to yield better understanding of the mechanisms underlying auxin transport polarization in other developmental contexts.

Indexed as

ArabidopsisArabidopsis ProteinsF-Box ProteinsGene Expression Regulation, PlantIndoleacetic AcidsPlant Growth RegulatorsReceptors, Cell SurfaceSignal TransductionArabidopsis ProteinsF-Box ProteinsIndoleacetic AcidsPlant Growth RegulatorsReceptors, Cell SurfaceTIR1 protein, ArabidopsisArabidopsis thalianaauxinauxin canalizationcell polarityPIN1TIR1/AFB

Identifiers

PMID31971254
PMCPMC7318144
OpenAlexW3000912890

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.