Evidence map›Paper›PMID 31970663›Full record

ArticleJournal of applied genetics2020

Interaction between serine carboxypeptidase-like protein TtGS5 and Annexin D1 in developing seeds of Triticum timopheevi.

Peihong Jiang, JianSheng Gao, Junyi Mu, Luning Duan, Yunsong Gu, Shichen Han, Lin Chen, Yaxuan Li, Yueming Yan, Xiaohui Li

Abstract read
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In one paragraph

Article in Journal of applied genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  3. Genome-Wide Identification of theInternational journal of molecular sciences · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. The Serine Carboxypeptidase-Like GenePlants (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Peihong JiangKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
JianSheng GaoDezhou Academy of Agricultural Sciences, Dezhou, Shandong, China.
Junyi MuKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Luning DuanKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Yunsong GuKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Shichen HanKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Lin ChenKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Yaxuan LiKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Yueming YanKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China.
Xiaohui LiKey Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, Beijing, China. lixiaohui@cnu.edu.cn.ORCID http://orcid.org/0000-0001-7667-9644
Capital Normal University · CNDazhou Academy of Agricultural Sciences · CN

Funding

National Key R&D Program of China 2016ZX08009003-004National Natural Science Foundation of China 31571652Natural Science Foundation of Beijing 6122002Natural Science Foundation of Beijing 6162002
6 · The paper itself

Abstract

GS5 encoding a serine carboxypeptidase-like protein positively regulates grain size and weight through the regulation of grain width and filling and is helpful in improving cereal yields. Grain width variation determined by GS5 is associated with cell number and size, but the actual underlying mechanism is still unclear. Two orthologs of GS5, TtGS5-3A-G and TtGS5-3G-G, were cloned from the Triticum timopheevi accession no. CWI17006. To identify the proteins that interacted with TtGS5-3A-G and TtGS5-3G-G in premature grains, we performed pull-down assays followed by liquid chromatography-mass spectrometry/mass spectrometry analysis. The analyses revealed 18 proteins were present in both the TtGS5-3A-G and TtGS5-3G-G interactomes. Among five candidates selected, only Annexin D1 interacted with both TtGS5-3A-G and TtGS5-3G-G in yeast. Annexin D1, TtGS5-3A-G, and TtGS5-3G-G were located on the cytoplasmic membranes of Arabidopsis protoplasts and onion epidermal cells, and interactions between Annexin D1 and TtGS5-3A-G, as well as TtGS5-3G-G, were shown by bimolecular fluorescence complementation assays. Annexin D1 was expressed widely in different tissues, and it co-expressed with TtGS5-3A-G/TtGS5-3G-G at the grain enlargement phase. These results indicated that Annexin D1 interacted with TtGS5-3A-G and TtGS5-3G-G in premature grains. Together with the structural similarities of Annexin D1 to known fiber elongation factors, we proposed that TtGS5 might regulate the cell size by interacting with Annexin D1. The results provide significant new information for understanding the roles that GS5 plays in regulating grain size, which may be useful in improving crop yields.

Indexed as

AnnexinsArabidopsisCarboxypeptidasesChromatography, LiquidGene Expression Regulation, PlantMass SpectrometryPlant DevelopmentProtoplastsSeedsTriticumAnnexinsCarboxypeptidasesserine carboxypeptidaseAnnexinGrain sizeTriticum timopheeviTtGS5

Identifiers

PMID31970663
OpenAlexW3000940475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.