Evidence map›Paper›PMID 31969654›Full record

ArticleScientific reports2020

Analysis of Copy-Number Variations and Feline Mammary Carcinoma Survival.

José Luis Granados-Soler, Kirsten Bornemann-Kolatzki, Julia Beck, Bertram Brenig, Ekkehard Schütz, Daniela Betz, Johannes Junginger, Marion Hewicker-Trautwein, Hugo Murua Escobar, Ingo Nolte

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

José Luis Granados-SolerSmall Animal Clinic, University of Veterinary Medicine Hannover Foundation, Hannover, Germany.ORCID http://orcid.org/0000-0001-6860-0166
Kirsten Bornemann-KolatzkiChronix Biomedical, Göttingen, Germany.
Julia BeckChronix Biomedical, Göttingen, Germany.
Bertram BrenigInstitute of Veterinary Medicine, University of Göttingen, Göttingen, Germany.
Ekkehard SchützChronix Biomedical, Göttingen, Germany.
Daniela BetzSmall Animal Clinic, University of Veterinary Medicine Hannover Foundation, Hannover, Germany.
Johannes JungingerDepartment of Pathology, University of Veterinary Medicine Hannover Foundation, Hannover, Germany.
Marion Hewicker-TrautweinDepartment of Pathology, University of Veterinary Medicine Hannover Foundation, Hannover, Germany.
Hugo Murua Escobar *Haematology, Oncology and Palliative Medicine, Clinic III, University of Rostock, Rostock, Germany.
Ingo Nolte *Small Animal Clinic, University of Veterinary Medicine Hannover Foundation, Hannover, Germany. Ingo.Nolte@tiho-hannover.de.
University of Veterinary Medicine Hannover, Foundation · DEUniversity of Göttingen · DEUniversity of Rostock · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Feline mammary carcinomas (FMCs) are highly malignant. As the disease-free survival (DFS) and overall survival (OS) are short, prognostication is crucial. Copy-number variations (CNVs) analysis by next-generation sequencing serves to identify critical cancer-related genomic regions. Thirty-three female cats with FMCs were followed during two years after surgery. Tumours represented tubulopapillary and solid carcinomas encompassing six molecular subtypes. Regardless of the histopathological diagnosis, molecular subtypes showed important differences in survival. Luminal A tumours exhibited the highest DFS (p = 0.002) and cancer-specific OS (p = 0.001), and the lowest amount of CNVs (p = 0.0001). In contrast, basal-like triple-negative FMCs had the worst outcome (DFS, p < 0.0001; and OS, p < 0.00001) and were the most aberrant (p = 0.05). In the multivariate analysis, copy-number losses (CNLs) in chromosome B1 (1-23 Mb) harbouring several tumour-repressors (e.g. CSMD1, MTUS1, MSR1, DBC2, and TUSC3) negatively influenced DFS. Whereas, copy-number gains (CNGs) in B4 (1-29 Mb) and F2 (64-82.3 Mb) comprising epithelial to mesenchymal transition genes and metastasis-promoting transcription factors (e.g. GATA3, VIM, ZEB1, and MYC) negatively influenced DFS and cancer-specific OS. These data evidence an association between specific CNVs in chromosomes B1, B4 and F2, and poor prognosis in FMCs.

Indexed as

AnimalsCat DiseasesCatsDNA Copy Number VariationsFemaleHigh-Throughput Nucleotide SequencingMammary Neoplasms, AnimalSurvival Analysis

Identifiers

PMID31969654
PMCPMC6976565
OpenAlexW3002470192

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.