Evidence map›Paper›PMID 31969641›Full record

ArticleScientific reports2020

Analysis of Terpene Synthase Family Genes in Camellia sinensis with an Emphasis on Abiotic Stress Conditions.

Han-Chen Zhou, Lubobi Ferdinand Shamala, Xing-Kai Yi, Zhen Yan, Shu Wei

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 97 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Han-Chen Zhou *State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Lubobi Ferdinand Shamala *State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Xing-Kai YiState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Zhen YanState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Shu WeiState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China. weishu@ahau.edu.cn.ORCID http://orcid.org/0000-0002-8803-9625
Anhui Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For a better understanding terpenoid volatile production in Camellia sinensis, global terpenoid synthase gene (TPS) transcription analysis was conducted based on transcriptomic data combined with terpenoid metabolic profiling under different abiotic stress conditions. Totally 80 TPS-like genes were identified. Twenty-three CsTPS genes possessed a complete coding sequence and most likely were functional. The remaining 57 in the currently available database lack essential gene structure or full-length transcripts. Distinct tempo-spatial expression patterns of CsTPS genes were found in tea plants. 17 genes were substantially expressed in all the tested organs with a few exceptions. The other 17 were predominantly expressed in leaves whereas additional eight were primarily expressed in flowers. Under the treatments of cold acclimation, salt and polyethylene glycol, CsTPS67, -69 and -71 were all suppressed and the inhibited expression of many others were found in multiple stress treatments. However, methyl jasmonate resulted in the enhanced expression of the majority of CsTPS genes. These transcription data were largely validated using qPCR. Moreover, volatile terpenoid profiling with leaves, flowers and stress-treated plants revealed a general association between the abundances of mono- and sesqui-terpenoids and some CsTPS genes. These results provide vital information for future studies on CsTPS regulation of terpenoid biosynthesis.

Indexed as

Gene Expression Regulation, PlantAcclimatizationAcetatesAlkyl and Aryl TransferasesCamellia sinensisCold TemperatureCyclopentanesFlowersMultigene FamilyOxylipinsPlant LeavesStress, PhysiologicalTerpenesTranscription, GeneticTranscriptomeAcetatesAlkyl and Aryl TransferasesCyclopentanesmethyl jasmonateOxylipinsTerpenesterpene synthase

Identifiers

PMID31969641
PMCPMC6976640
OpenAlexW3007427083

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.