Evidence map›Paper›PMID 31969391›Full record

ArticleThe Journal of biological chemistry2020

The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.

Alexandra A Richter, Stefanie Kobus, Laura Czech, Astrid Hoeppner, Jan Zarzycki, Tobias J Erb, Lukas Lauterbach, Jeroen S Dickschat, Erhard Bremer, Sander H J Smits

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  6. Development of a Pantetheine Force Field Library for Molecular Modeling.Journal of chemical information and modeling · 2021
    Article
  7. Article
  8. Gcn5-RelatedFrontiers in molecular biosciences · 2021
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Alexandra A RichterDepartment of Biology, Laboratory for Microbiology, Philipps-University Marburg, D-35043 Marburg, Germany; SYNMIKRO Research Center, Philipps-University Marburg, D-35043 Marburg, Germany.
Stefanie KobusCenter for Structural Studies, Heinrich-Heine University Düsseldorf, D-40225 Düsseldorf, Germany.
Laura CzechDepartment of Biology, Laboratory for Microbiology, Philipps-University Marburg, D-35043 Marburg, Germany; SYNMIKRO Research Center, Philipps-University Marburg, D-35043 Marburg, Germany.
Astrid HoeppnerCenter for Structural Studies, Heinrich-Heine University Düsseldorf, D-40225 Düsseldorf, Germany.
Jan ZarzyckiDepartment of Biochemistry and Synthetic Metabolism, Max-Planck-Institute for Terrestrial Microbiology, D-35043 Marburg, Germany.
Tobias J ErbSYNMIKRO Research Center, Philipps-University Marburg, D-35043 Marburg, Germany; Department of Biochemistry and Synthetic Metabolism, Max-Planck-Institute for Terrestrial Microbiology, D-35043 Marburg, Germany.
Lukas LauterbachKekulé-Institute for Organic Chemistry and Biochemistry, Friedrich-Wilhelms-University Bonn, D-53121 Bonn, Germany.
Jeroen S DickschatKekulé-Institute for Organic Chemistry and Biochemistry, Friedrich-Wilhelms-University Bonn, D-53121 Bonn, Germany.
Erhard BremerDepartment of Biology, Laboratory for Microbiology, Philipps-University Marburg, D-35043 Marburg, Germany; SYNMIKRO Research Center, Philipps-University Marburg, D-35043 Marburg, Germany. Electronic address: bremer@staff.uni-marburg.de.
Sander H J SmitsCenter for Structural Studies, Heinrich-Heine University Düsseldorf, D-40225 Düsseldorf, Germany; Institute of Biochemistry, Heinrich-Heine University Düsseldorf, D-40225 Düsseldorf, Germany. Electronic address: sander.smits@hhu.de.
Heinrich Heine University Düsseldorf · DEPhilipps University of Marburg · DEUniversity of Bonn · DELoewe Center for Synthetic Microbiology · DEMax Planck Institute for Terrestrial Microbiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ectoine is a solute compatible with the physiologies of both prokaryotic and eukaryotic cells and is widely synthesized by bacteria as an osmotic stress protectant. Because it preserves functional attributes of proteins and macromolecular complexes, it is considered a chemical chaperone and has found numerous practical applications. However, the mechanism of its biosynthesis is incompletely understood. The second step in ectoine biosynthesis is catalyzed by l-2,4-diaminobutyrate acetyltransferase (EctA; EC 2.3.1.178), which transfers the acetyl group from acetyl-CoA to EctB-formed l-2,4-diaminobutyrate (DAB), yielding

Indexed as

Catalytic DomainAcetyltransferasesAmino Acids, DiaminoBacterial ProteinsCrystallography, X-RayDimerizationMutagenesis, Site-DirectedPaenibacillusStructure-Activity RelationshipAcetyltransferasesAmino Acids, DiaminoBacterial Proteinsectoineacetylationacetyl coenzyme A (acetyl-CoA)acetyltransferasechemical chaperonecrystal structureenzymeL-2,4-diaminobutyratereaction mechanismstress responsestructural biology

Identifiers

PMID31969391
PMCPMC7049965
OpenAlexW3002497251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.