Evidence map›Paper›PMID 31969115›Full record

ArticleBMC evolutionary biology2020

Exploring molecular evolution of Rubisco in C

Carmen Hermida-Carrera, Mario A Fares, Marcel Font-Carrascosa, Maxim V Kapralov, Marcus A Koch, Arnau Mir, Arántzazu Molins, Miquel Ribas-Carbó, Jairo Rocha, Jeroni Galmés

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
10.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
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  8. Genetic markers in AndeanEcology and evolution · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Carmen Hermida-CarreraResearch Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears-INAGEA, Ctra. Valldemossa km. 7.5, 07122, Palma, Illes Balears, Spain.
Mario A FaresIntegrative and Systems Biology Group, Department of Abiotic Stress, Instituto de Biología Molecular y Celular de Plantas (CSIC-UPV), 46022, Valencia, Spain.
Marcel Font-CarrascosaResearch Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears-INAGEA, Ctra. Valldemossa km. 7.5, 07122, Palma, Illes Balears, Spain.
Maxim V KapralovSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, United Kingdom.
Marcus A KochDepartment of Biodiversity and Plant Systematics, Centre for Organismal Studies (COS) Heidelberg, Heidelberg University, Im Neuenheimer Feld 345, 9120, Heidelberg, Germany.
Arnau MirComputational Biology and Bioinformatics Research Group, Department of Mathematics and Computer Science, Universitat de les Illes Balears, 07122, Palma, Illes Balears, Spain.
Arántzazu MolinsResearch Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears-INAGEA, Ctra. Valldemossa km. 7.5, 07122, Palma, Illes Balears, Spain.
Miquel Ribas-CarbóResearch Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears-INAGEA, Ctra. Valldemossa km. 7.5, 07122, Palma, Illes Balears, Spain.
Jairo RochaComputational Biology and Bioinformatics Research Group, Department of Mathematics and Computer Science, Universitat de les Illes Balears, 07122, Palma, Illes Balears, Spain.
Jeroni GalmésResearch Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears-INAGEA, Ctra. Valldemossa km. 7.5, 07122, Palma, Illes Balears, Spain. jeroni.galmes@uib.cat.ORCID 0000-0002-7299-9349
Universitat de les Illes Balears · ESHeidelberg University · DENewcastle University · GBTrinity College Dublin · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe CO

resultsWe identified potential positively selected sites and residues with signatures of co-adaptation. The implementation of a decision tree model related Rubisco specific variable sites to the leaf carbon isotopic composition of the species. Differences in the Rubisco catalytic traits found among C

conclusionsThe results revealed that the variability in the Rubisco L-subunit sequence in orchids and bromeliads is composed of coevolving sites under potential positive adaptive signal. The sequence variability was related to δ

Indexed as

Evolution, MolecularAdaptation, PhysiologicalBromeliaceaeCarbonCarbon IsotopesKineticsOrchidaceaePhotosynthesisPhylogenyPlant LeavesProtein SubunitsRibulose-Bisphosphate CarboxylaseSelection, GeneticCarbonCarbon IsotopesProtein SubunitsRibulose-Bisphosphate CarboxylaseC3CAMCarboxylationCatalytic rateCoevolutionDecision treePositive selectionRubisco

Identifiers

PMID31969115
PMCPMC6977233
OpenAlexW3013692929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.