Evidence map›Paper›PMID 31968691›Full record

ArticleInternational journal of molecular sciences2020

Nitrate and Ammonium Affect the Overall Maize Response to Nitrogen Availability by Triggering Specific and Common Transcriptional Signatures in Roots.

Laura Ravazzolo, Sara Trevisan, Cristian Forestan, Serena Varotto, Stefania Sut, Stefano Dall'Acqua, Mario Malagoli, Silvia Quaggiotti

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 51 citations in OpenAlex.

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  14. Review
  15. Combined Transcriptome and Proteome Analysis of Masson Pine (International journal of molecular sciences · 2020
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  16. Comparison of Biostimulant Treatments inPlants (Basel, Switzerland) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Laura RavazzoloDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
Sara TrevisanDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
Cristian ForestanDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
Serena VarottoDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
Stefania SutDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
Stefano Dall'AcquaDepartment of Pharmaceutical and Pharmacological Sciences, University of Padova-Via Marzolo 5, 35121 Padova, Italy.
Mario MalagoliDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
Silvia QuaggiottiDepartment of Agronomy, Food, Natural resources, Animals and Environment, University of Padova, Agripolis-V.le dell'Università, 16, 35020 Legnaro (PD), Italy.
University of Padua · IT

Funding

RENAL PATHOGENICITY OF ANTIDNA ANTIBODIESK08AR002015 · NIAMS · YESHIVA UNIVERSITY · PI PUTTERMAN, CHAIM · 1997 to 2001
$252k
Fondazione Cassa di Risparmio di Padova e Rovigo CARIPARO 2015Università degli Studi di Padova BIRD 198379Università degli Studi di Padova DOR: 2018-2019
6 · The paper itself

Abstract

Nitrogen (N) is an essential macronutrient for crops. Plants have developed several responses to N fluctuations, thus optimizing the root architecture in response to N availability. Nitrate and ammonium are the main inorganic N forms taken up by plants, and act as both nutrients and signals, affecting gene expression and plant development. In this study, RNA-sequencing was applied to gain comprehensive information on the pathways underlying the response of maize root, pre-treated in an N-deprived solution, to the provision of nitrate or ammonium. The analysis of the transcriptome shows that nitrate and ammonium regulate overlapping and distinct pathways, thus leading to different responses. Ammonium activates the response to stress, while nitrate acts as a negative regulator of transmembrane transport. Both the N-source repress genes related to the cytoskeleton and reactive oxygen species detoxification. Moreover, the presence of ammonium induces the accumulation of anthocyanins, while also reducing biomass and chlorophyll and flavonoids accumulation. Furthermore, the later physiological effects of these nutrients were evaluated through the assessment of shoot and root growth, leaf pigment content and the amino acid concentrations in root and shoot, confirming the existence of common and distinct features in response to the two nitrogen forms.

Indexed as

TranscriptomeAmino AcidsAmmonium CompoundsCluster AnalysisGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantNitratesNitrogenPlant RootsSequence Analysis, RNAZea maysAmino AcidsAmmonium CompoundsNitratesNitrogenamino acidsammoniumgene expressionmaizenitrateplant developmentRNA-Seqroot

Identifiers

PMID31968691
PMCPMC7013554
OpenAlexW3000539382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.