Evidence map›Paper›PMID 31968530›Full record

ArticleBiomolecules2020

Back to GroEL-Assisted Protein Folding: GroES Binding-Induced Displacement of Denatured Proteins from GroEL to Bulk Solution.

Victor Marchenkov, Andrey Gorokhovatsky, Natalia Marchenko, Tanya Ivashina, Gennady Semisotnov

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Victor MarchenkovInstitute of Protein Research, Russian Academy of Sciences, Institutskaya Street 4, 142290 Pushchino, Russia.
Andrey GorokhovatskyShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Ulitsa Miklukho-Maklaya 16/10, GSP-7, 117997 Moscow, Russia.
Natalia MarchenkoInstitute of Protein Research, Russian Academy of Sciences, Institutskaya Street 4, 142290 Pushchino, Russia.
Tanya IvashinaSkryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Prospect Nauki 5, 142290 Pushchino, Russia.
Gennady SemisotnovInstitute of Protein Research, Russian Academy of Sciences, Institutskaya Street 4, 142290 Pushchino, Russia.
Institute of Protein Research · RUG. K. Skryabin Institute of Biochemistry and Physiology of Microorganisms · RUInstitute of Bioorganic Chemistry · RU

Funding

"Molecular and Cell Biology" Program of the Russian Academy of Sciences 01201358029Russian Science Foundation 14-24-00157
6 · The paper itself

Abstract

The main events in chaperone-assisted protein folding are the binding and ligand-induced release of substrate proteins. Here, we studied the location of denatured proteins previously bound to the GroEL chaperonin resulting from the action of the GroES co-chaperonin in the presence of Mg-ATP. Fluorescein-labeled denatured proteins (α-lactalbumin, lysozyme, serum albumin, and pepsin in the presence of thiol reagents at neutral pH, as well as an early refolding intermediate of malate dehydrogenase) were used to reveal the effect of GroES on their interaction with GroEL. Native electrophoresis has demonstrated that these proteins tend to be released from the GroEL-GroES complex. With the use of biotin- and fluorescein-labeled denatured proteins and streptavidin fused with luciferase aequorin (the so-called streptavidin trap), the presence of denatured proteins in bulk solution after GroES and Mg-ATP addition has been confirmed. The time of GroES-induced dissociation of a denatured protein from the GroEL surface was estimated using the stopped-flow technique and found to be much shorter than the proposed time of the GroEL ATPase cycle.

Indexed as

Protein FoldingAdenosine TriphosphateAnimalsCattleChaperonin 10Chaperonin 60Escherichia coliEscherichia coli ProteinsProtein BindingProtein DenaturationProtein Interaction MapsAdenosine TriphosphateChaperonin 10Chaperonin 60Escherichia coli ProteinsbioluminescencechaperoninsfluorescenceGroEL-assisted protein foldingprotein-protein interaction

Identifiers

PMID31968530
PMCPMC7022901
OpenAlexW3000124304

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.