Evidence map›Paper›PMID 31967646›Full record

ArticleThe Journal of experimental medicine2020

Transcriptional profiling identifies caspase-1 as a T cell-intrinsic regulator of Th17 differentiation.

Yajing Gao, Krystin Deason, Aakanksha Jain, Ricardo A Irizarry-Caro, Igor Dozmorov, Laura A Coughlin, Isabella Rauch, Bret M Evers, Andrew Y Koh, Edward K Wakeland and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Contextualizing TNature reviews. Immunology · 2026
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  6. Granzyme B-activated IL18 potentiates αβ and γδ CAR T cell immunotherapy in a tumor-dependent manner.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  7. Review
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  9. AIM2 promotes TiScience · 2023
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  10. Species-specific CD4Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yajing GaoDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX.
Krystin DeasonImmunology Graduate Program, University of Texas Southwestern Medical Center, Dallas, TX.
Aakanksha JainDivision of Immunobiology, Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH.
Ricardo A Irizarry-CaroDivision of Immunobiology, Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH.
Igor DozmorovDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX.
Laura A CoughlinDepartment of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX.
Isabella RauchDepartment of Molecular Microbiology and Immunology, Oregon Health & Science University, Portland, OR.
Bret M EversDepartment of Pathology, University of Texas Southwestern Medical Center, Dallas, TX.
Andrew Y KohDepartment of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX.
Edward K WakelandDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX.
Chandrashekhar PasareDivision of Immunobiology, Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH.
The University of Texas Southwestern Medical Center · USCincinnati Children's Hospital Medical Center · USOregon Health & Science University · US

Funding

INTEGRATIVE IMMUNOLOGY TRAINING PROGRAMT32AI005284 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Nan Yan · 2003 to 2026
$7.4M
Innate mechanisms of regulation of Th17 responsesR01AI123176 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Chandrashekhar Pasare · 2017 to 2026
$4.4M
ROLE OF BCAP IN REGULATING INFLAMMATION AND ADAPTIVE IMMUNITYR01AI113125 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI PASARE, CHANDRASHEKHAR · 2015 to 2019
$1.8M
Endocytic Trafficking and Cell Signaling in Models of ARC SyndromeR01GM120196 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI KRAMER, HELMUT J · 2017 to 2020
$1.3M
NIAID NIH HHS R01 AI113125NIAID NIH HHS R01 AI123176NIAID NIH HHS T32 AI005284NIGMS NIH HHS R01 GM120196
6 · The paper itself

Abstract

Dendritic cells (DCs) are critical for the differentiation of pathogen-specific CD4 T cells. However, to what extent innate cues from DCs dictate transcriptional changes in T cells remains elusive. Here, we used DCs stimulated with specific pathogens to prime CD4 T cells in vitro and found that these T cells express unique transcriptional profiles dictated by the nature of the priming pathogen. More specifically, the transcriptome of in vitro C. rodentium-primed Th17 cells resembled that of Th17 cells primed following infection in vivo but was remarkably distinct from cytokine-polarized Th17 cells. We identified caspase-1 as a unique gene up-regulated only in pathogen-primed Th17 cells and discovered a critical role for T cell-intrinsic caspase-1, independent of inflammasome, in optimal priming of Th17 responses. T cells lacking caspase-1 failed to induce colitis or confer protection against C. rodentium infection due to suboptimal Th17 cell differentiation in vivo. This study underlines the importance of DC-mediated priming in identifying novel regulators of T cell differentiation.

Indexed as

AnimalsCaspase 1Cell DifferentiationCell Line, TumorCell PolarityCitrobacter rodentiumColitisCytokinesDendritic CellsEnterobacteriaceae InfectionsFemaleGene Knockout TechniquesInflammasomesLymphocyte ActivationMaleMiceCasp1 protein, mouseCaspase 1CytokinesInflammasomes

Identifiers

PMID31967646
PMCPMC7144520
OpenAlexW3001655988

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.