Evidence map›Paper›PMID 31964809›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Small-molecule targeted recruitment of a nuclease to cleave an oncogenic RNA in a mouse model of metastatic cancer.

Matthew G Costales, Haruo Aikawa, Yue Li, Jessica L Childs-Disney, Daniel Abegg, Dominic G Hoch, Sai Pradeep Velagapudi, Yoshio Nakai, Tanya Khan, Kye Won Wang and 4 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 183 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Induced proximity-based therapeutic modalities.Nature reviews. Drug discovery · 2026
    Review
  5. Review
  6. Review
  7. RNA Triple Helices: From Structures and Mechanisms to Therapeutic Targets.International journal of biological sciences · 2026
    Review
  8. RNA G-Quadruplex RIBOTAC-Mediated Targeted Degradation of lncRNA TERRA.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  9. Article
  10. Targeted RNA Degradation as a Promising Therapeutic Strategy.International journal of molecular sciences · 2025
    Review
  11. Article
  12. Advances in Proximity-Assisted Bioconjugation.Accounts of chemical research · 2025
    Review
  13. Review
  14. Article
  15. Review
  16. [Targeting chimera technology: A new tool for undruggable in breast cancer].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2025
    Review
  17. Article
  18. Review
  19. Article
  20. Review

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Matthew G CostalesDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Haruo AikawaDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Yue LiDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Jessica L Childs-DisneyDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Daniel AbeggDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Dominic G HochDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Sai Pradeep VelagapudiDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Yoshio NakaiDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Tanya KhanDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Kye Won WangDepartment of Chemistry and Biochemistry, Florida Atlantic University, Jupiter, FL 33458.
Ilyas YildirimDepartment of Chemistry and Biochemistry, Florida Atlantic University, Jupiter, FL 33458.
Alexander AdibekianDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458.
Eric T WangDepartment of Molecular Genetics & Microbiology, University of Florida, Gainesville, FL 32610.
Matthew D DisneyDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458; DISNEY@scripps.edu.ORCID 0000-0001-8486-1796
Scripps Research Institute · USFlorida Atlantic University · USUniversity of Florida · US

Funding

Using a disease-affected cell to synthesize its own drugDP1NS096898 · NINDS · SCRIPPS FLORIDA · PI DISNEY, MATTHEW D · 2015 to 2019
$5.0M
Sequence-based Design of Small Molecules Targeting RNAR01GM097455 · NIGMS · SCRIPPS FLORIDA · PI DISNEY, MATTHEW D · 2012 to 2019
$4.6M
NIGMS NIH HHS R01 GM097455NINDS NIH HHS DP1 NS096898
6 · The paper itself

Abstract

As the area of small molecules interacting with RNA advances, general routes to provide bioactive compounds are needed as ligands can bind RNA avidly to sites that will not affect function. Small-molecule targeted RNA degradation will thus provide a general route to affect RNA biology. A non-oligonucleotide-containing compound was designed from sequence to target the precursor to oncogenic microRNA-21 (pre-miR-21) for enzymatic destruction with selectivity that can exceed that for protein-targeted medicines. The compound specifically binds the target and contains a heterocycle that recruits and activates a ribonuclease to pre-miR-21 to substoichiometrically effect its cleavage and subsequently impede metastasis of breast cancer to lung in a mouse model. Transcriptomic and proteomic analyses demonstrate that the compound is potent and selective, specifically modulating oncogenic pathways. Thus, small molecules can be designed from sequence to have all of the functional repertoire of oligonucleotides, including inducing enzymatic degradation, and to selectively and potently modulate RNA function in vivo.

Indexed as

AnimalsBreast NeoplasmsCell Line, TumorDisease Models, AnimalDrug DesignFemaleHumansMiceMicroRNAsMolecular StructureNeoplasm MetastasisOligonucleotidesRibonucleasesSmall Molecule LibrariesMicroRNAsMIRN21 microRNA, mouseOligonucleotidesRibonucleasesSmall Molecule Librariescancerchemical biologymetastaticnucleic acidsRNA

Identifiers

PMID31964809
PMCPMC7007575
OpenAlexW3002989313

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.