Evidence map›Paper›PMID 31964372›Full record

ArticleMicrobial cell factories2020

A secretion biosensor for monitoring Sec-dependent protein export in Corynebacterium glutamicum.

Sarah Jurischka, Astrid Bida, Doris Dohmen-Olma, Britta Kleine, Janko Potzkei, Stephan Binder, Georg Schaumann, Patrick J Bakkes, Roland Freudl

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sarah JurischkaInstitut für Bio- und Geowissenschaften 1, IBG1: Biotechnologie, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.
Astrid BidaInstitut für Bio- und Geowissenschaften 1, IBG1: Biotechnologie, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.
Doris Dohmen-OlmaInstitut für Bio- und Geowissenschaften 1, IBG1: Biotechnologie, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.
Britta KleineInstitut für Bio- und Geowissenschaften 1, IBG1: Biotechnologie, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.
Janko PotzkeiSenseUp GmbH, c/o Campus Forschungszentrum, Wilhelm-Johnen-Strasse, 52428, Jülich, Germany.
Stephan BinderSenseUp GmbH, c/o Campus Forschungszentrum, Wilhelm-Johnen-Strasse, 52428, Jülich, Germany.
Georg SchaumannSenseUp GmbH, c/o Campus Forschungszentrum, Wilhelm-Johnen-Strasse, 52428, Jülich, Germany.
Patrick J BakkesInstitut für Bio- und Geowissenschaften 1, IBG1: Biotechnologie, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.
Roland FreudlInstitut für Bio- und Geowissenschaften 1, IBG1: Biotechnologie, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany. r.freudl@fz-juelich.de.ORCID http://orcid.org/0000-0003-0743-1279
Forschungszentrum Jülich · DE

Funding

Bioeconomy Science Center 313/322-400-002 13BioNRW w0805wb003cBundesministerium für Bildung, Wissenschaft, Forschung und Technologie Go-Bio 6: 031A381/031B0392CLIB Competence Center Biotechnology (CKB) 34.EFRE-0300097
6 · The paper itself

Abstract

backgroundIn recent years, the industrial workhorse Corynebacterium glutamicum has gained increasing interest as a host organism for the secretory production of heterologous proteins. Generally, the yield of a target protein in the culture supernatant depends on a multitude of interdependent biological and bioprocess parameters which have to be optimized. So far, the monitoring of such optimization processes depends on the availability of a direct assay for the respective target protein that can be handled also in high throughput approaches. Since simple assays, such as standard enzymatic activity assays, are not always at hand, the availability of a general protein secretion biosensor is highly desirable.

resultsHigh level secretion of proteins via the Sec protein export pathway leads to secretion stress, a phenomenon that is thought to be caused by the accumulation of incompletely or misfolded proteins at the membrane-cell envelope interface. We have analyzed the transcriptional responses of C. glutamicum to the secretory production of two different heterologous proteins and found that, in both cases, the expression of the gene encoding a homologue of the extracytosolic HtrA protease was highly upregulated. Based on this finding, a C. glutamicum Sec secretion biosensor strain was constructed in which the htrA gene on the chromosome was replaced by the eyfp gene. The fluorescence of the resulting reporter strain responded to the secretion of different heterologous proteins (cutinase from Fusarium solani pisi and alkaline phosphatase PhoA from Escherichia coli) in a dose-dependent manner. In addition, three differently efficient signal peptides for the secretory production of the cutinase could be differentiated by the biosensor signal. Furthermore, we have shown that an efficient signal peptide can be separated from a poor signal peptide by using the biosensor signal of the respective cells in fluorescence activated cell sorting experiments.

conclusionsWe have succeeded in the construction of a C. glutamicum biosensor strain that allows for the monitoring of Sec-dependent secretion of heterologous proteins in a dose-dependent manner, independent of a direct assay for the desired target protein.

Indexed as

Biosensing TechniquesBacterial ProteinsBiotechnologyCorynebacterium glutamicumGenetic EngineeringProtein Sorting SignalsRecombinant ProteinsSecretory PathwayVesicular Transport ProteinsBacterial ProteinsProtein Sorting SignalsRecombinant ProteinsVesicular Transport ProteinsCorynebacterium glutamicumFACS analysisHeterologous protein productionSec pathwaySecretion biosensorSignal peptide variation

Identifiers

PMID31964372
PMCPMC6975037
OpenAlexW3007388071

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.