Evidence map›Paper›PMID 31961925›Full record

ArticleBlood2020

Genomic landscape of young ATLL patients identifies frequent targetable CD28 fusions.

Noriaki Yoshida, Kay Shigemori, Nicholas Donaldson, Christopher Trevisani, Nicolas A Cordero, Kristen E Stevenson, Xia Bu, Fumiko Arakawa, Mai Takeuchi, Koichi Ohshima and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 34 citations in OpenAlex.

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  18. Mice transgenic for humanOncoimmunology · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Noriaki YoshidaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Kay ShigemoriDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Nicholas DonaldsonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Christopher TrevisaniDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Nicolas A CorderoDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Kristen E StevensonDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA.
Xia BuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Fumiko ArakawaDepartment of Pathology, School of Medicine, Kurume University, Fukuoka, Japan.
Mai TakeuchiDepartment of Pathology, School of Medicine, Kurume University, Fukuoka, Japan.
Koichi OhshimaDepartment of Pathology, School of Medicine, Kurume University, Fukuoka, Japan.
Akinori YodaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan; and.
Samuel Y NgDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
David M WeinstockDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Dana-Farber Cancer Institute · USKurume University · JPBroad Institute · USKyoto University · JP

Funding

Targeting High-Risk Lymphoid NeoplasmsR35CA231958 · NCI · DANA-FARBER CANCER INST · PI WEINSTOCK, DAVID MARC · 2019 to 2021
$2.9M
Mechanistic Determinants of Follicular-Helper T-cell LymphomagenesisK08CA241089 · NCI · DANA-FARBER CANCER INST · PI NG, SAMUEL YAO-MING · 2019 to 2021
$752k
NCI NIH HHS K08 CA241089NCI NIH HHS R35 CA231958
6 · The paper itself

Abstract

Adult T-cell leukemia/lymphoma (ATLL) in Japan presents at a median age of 70 years and only 5% of patients are <50 years of age. We conducted RNA and targeted DNA sequencing of 8 ATLLs from Japanese patients <50 years of age and identified 3 (37.5%) with both CTLA4-CD28 and inducible costimulator (ICOS)-CD28 fusions. Mutations of PLCG1, PRKCB, and STAT3, which were frequent in other ATLL-sequencing studies, were not identified. Differential expression analysis identified the negative checkpoint molecule LAG3 as the most downregulated gene among cases with the fusions. Immunohistochemistry demonstrated expression of CD80 and CD86, the ligands for CTLA4 and CD28, on ATLL cells and tumor-associated macrophages, respectively. Expression of CTLA4-CD28 in Ba/F3 cells conferred cytokine-independent growth when cocultured with Raji cells that express CD80 and CD86. Growth was associated with recruitment of the p85 subunit of phosphatidylinositol 3-kinase to CTLA4-CD28 and phosphorylation of AKT and extracellular signal-regulated kinase. A CTLA4-blocking antibody reduced cytokine-independent growth in a dose-dependent manner. Together, these results suggest that young Japanese ATLL cases have a unique biology dependent on cell-nonautonomous interactions that drive CD28 signaling. Assessment for CD28 fusions and treatment with CTLA4 blockade should be considered in younger patients with relapsed/refractory ATLL.

Indexed as

Genome, HumanMutationBiomarkers, TumorCD28 AntigensCTLA-4 AntigenFemaleFollow-Up StudiesGene Expression ProfilingGene Expression Regulation, NeoplasticHumansLeukemia-Lymphoma, Adult T-CellMaleMiddle AgedOncogene Proteins, FusionPrognosisBiomarkers, TumorCD28 AntigensCTLA-4 AntigenCTLA4 protein, humanOncogene Proteins, Fusion

Identifiers

PMID31961925
PMCPMC7180081
OpenAlexW2989168215

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.