Evidence map›Paper›PMID 31961914›Full record

ArticlePLoS pathogens2020

CFTR dysregulation drives active selection of the gut microbiome.

Stacey M Meeker, Kevin S Mears, Naseer Sangwan, Mitchell J Brittnacher, Eli J Weiss, Piper M Treuting, Nicholas Tolley, Christopher E Pope, Kyle R Hager, Anh T Vo and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 79 citations in OpenAlex.

  1. Pooled it
  2. Pathophysiology of cystic fibrosis-related liver disease.Current opinion in gastroenterology · 2026
    Review
  3. Review
  4. Symptom factors and their clinical correlates among adults with cystic fibrosis.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2025
    Article
  5. Article
  6. Review
  7. Observational
  8. The function of chloride channels in digestive system disease (Review).International journal of molecular medicine · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. IntestinalmBio · 2024
    Article
  16. AnJournal of bacteriology · 2024
    Article
  17. Review
  18. Article
  19. Observational
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Stacey M MeekerDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.
Kevin S MearsDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.ORCID 0000-0002-2061-497X
Naseer SangwanCenter for Microbiome and Human Health, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, United States of America.ORCID 0000-0002-2407-769X
Mitchell J BrittnacherDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.
Eli J WeissDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.
Piper M TreutingDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.ORCID 0000-0002-1812-1519
Nicholas TolleyDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.ORCID 0000-0003-0358-0074
Christopher E PopeDepartment Pediatrics, University of Washington, Seattle, WA, United States of America.
Kyle R HagerDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.
Anh T VoDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.
Jisun PaikDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.
Charles W FrevertDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.ORCID 0000-0002-1037-3244
Hillary S HaydenDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.
Lucas R HoffmanDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.ORCID 0000-0001-8864-6751
Samuel I MillerDepartment of Microbiology, University of Washington, Seattle, WA, United States of America.
Adeline M HajjarDepartment of Comparative Medicine, University of Washington, Seattle, WA, United States of America.ORCID 0000-0002-4838-8070
University of Washington · USCleveland Clinic Lerner College of Medicine · US

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Karin E Bornfeldt · 1986 to 2026
$41.4M
Translational Research Center to Expedite Novel Therapies in Cystic FibrosisP30DK089507 · NIDDK · SEATTLE CHILDREN'S HOSPITAL · PI Christopher Hooper Goss, Lucas R Hoffman · 2010 to 2026
$21.4M
Patient-oriented microbiome and advanced culture approaches to identifying the microbial determinants of chronic pediatric diseaseK24HL141669 · NHLBI · UNIVERSITY OF WASHINGTON · PI Lucas R Hoffman · 2018 to 2026
$929k
Vitamin D mediated protection in inflammatory bowel diseaseK01OD021420 · OD · UNIVERSITY OF WASHINGTON · PI MEEKER, STACEY MARIE · 2016 to 2019
$592k
NHLBI NIH HHS K24 HL141669NIDDK NIH HHS P30 DK017047NIDDK NIH HHS P30 DK089507NIH HHS K01 OD021420
6 · The paper itself

Abstract

Patients with cystic fibrosis (CF) have altered fecal microbiomes compared to those of healthy controls. The magnitude of this dysbiosis correlates with measures of CF gastrointestinal (GI) disease, including GI inflammation and nutrient malabsorption. However, whether this dysbiosis is caused by mutations in the CFTR gene, the underlying defect in CF, or whether CF-associated dysbiosis augments GI disease was not clear. To test the relationships between CFTR dysfunction, microbes, and intestinal health, we established a germ-free (GF) CF mouse model and demonstrated that CFTR gene mutations are sufficient to alter the GI microbiome. Furthermore, flow cytometric analysis demonstrated that colonized CF mice have increased mesenteric lymph node and spleen TH17+ cells compared with non-CF mice, suggesting that CFTR defects alter adaptive immune responses. Our findings demonstrate that CFTR mutations modulate both the host adaptive immune response and the intestinal microbiome.

Indexed as

Gastrointestinal MicrobiomeAnimalsBacteriaCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorDisease Models, AnimalDysbiosisFemaleHumansIntestinesMaleMiceMice, Inbred C57BLMutationCystic Fibrosis Transmembrane Conductance Regulator

Identifiers

PMID31961914
PMCPMC6994172
OpenAlexW3002179032

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.