Evidence map›Paper›PMID 31961065›Full record

ArticleArthritis & rheumatology (Hoboken, N.J.)2020

Identification of Cartilage Microbial DNA Signatures and Associations With Knee and Hip Osteoarthritis.

Christopher M Dunn, Cassandra Velasco, Alexander Rivas, Madison Andrews, Cassandra Garman, Paul B Jacob, Matlock A Jeffries

Open access · greenAbstract read
In one paragraph

Article in Arthritis & rheumatology (Hoboken, N.J.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 3 pooled it
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 3 syntheses or guidelines pooled it, 98 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Review
  6. The gut-joint axis in osteoarthritis.Nature reviews. Rheumatology · 2026
    Review
  7. Review
  8. Analysis of gut microbiota characteristics in osteoarthritis patients.Frontiers in cellular and infection microbiology · 2026
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Is Osteoarthritis a State of Joint Dysbiosis?Antibiotics (Basel, Switzerland) · 2025
    Review
  15. Article
  16. Journal of microbiology and biotechnology · 2025
    Article
  17. Gut and Joint Microbiomes: Implications in Osteoarthritis.Rheumatic diseases clinics of North America · 2025
    Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Christopher M DunnUniversity of Oklahoma Health Sciences Center and Oklahoma Medical Research Foundation, Oklahoma City.
Cassandra VelascoUniversity of Oklahoma Health Sciences Center and Oklahoma Medical Research Foundation, Oklahoma City.
Alexander RivasUniversity of Arkansas for Medical Sciences, Little Rock.
Madison AndrewsUniversity of Oklahoma Health Sciences Center and Oklahoma Medical Research Foundation, Oklahoma City.
Cassandra GarmanUniversity of Oklahoma Health Sciences Center and Oklahoma Medical Research Foundation, Oklahoma City.
Paul B JacobOklahoma Joint Reconstruction Institute, Oklahoma City.
Matlock A JeffriesUniversity of Oklahoma Health Sciences Center and Oklahoma Medical Research Foundation, Oklahoma City.ORCID 0000-0001-9516-4312
Oklahoma Medical Research Foundation · USOklahoma Blood Institute · USUniversity of Arkansas for Medical Sciences · US

Funding

Research Resource for Human Organs and Tissues (U42)U42OD011158 · OD · NATIONAL DISEASE RESEARCH INTERCHANGE · PI BELL, THOMAS J · 2012 to 2025
$25.0M
Visualizing insulin actions on neuronal metabolism and function using fluorescent biosensorsP20GM125528 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Marisol Castillo-Castrejon · 2019 to 2026
$17.8M
An integrative study of circulating leukocyte composition, epigenetic patterns, and functional consequences in knee osteoarthritis.K08AR070891 · NIAMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI JEFFRIES, MATLOCK · 2017 to 2021
$862k
NIAMS NIH HHS K08 AR070891NIGMS NIH HHS P20 GM125528NIH HHS U42 OD011158
6 · The paper itself

Abstract

objectiveAlterations of the gut microbiota have been implicated in many forms of arthritis, but an examination of cartilage microbial patterns has not been performed. This study was undertaken to characterize the microbial DNA profile of articular cartilage and determine changes associated with osteoarthritis (OA).

methodsWe performed 16S ribosomal RNA gene deep sequencing on eroded and intact cartilage samples from knee OA patients (n = 21 eroded and 21 intact samples) and hip OA patients (n = 34 eroded and 33 intact samples) and cadaver controls (n = 10 knee samples and 10 hip samples). Microbial DNA diversity was assessed, groups were compared, and metagenomic profiles were reconstructed. Confirmation was performed in an independent cohort by clade-specific quantitative polymerase chain reaction. Findings in human cartilage were compared to those in cartilage from OA-susceptible C57BL/6 (B6) mice and OA-resistant MRL/MpJ (MRL) mice. Germ-free B6 mouse cartilage was analyzed as a methodologic control.

resultsAlpha diversity was reduced in human OA versus control samples (P < 0.0001), and in hip versus knee samples (P < 0.0001). Numerous clades were different in human OA versus control samples, and similar findings were noted in comparisons of murine B6 versus MRL mice. Hip samples were microbiologically distinct from knee samples. OA microbial DNA demonstrated increased gram-negative constituents (P = 0.02). Functional analysis demonstrated increases in lipopolysaccharide production (P = 9.9 × 10

conclusionOur study reveals a microbial DNA signature in human and mouse cartilage. Alterations in this signature, including increases in gram-negative constituents, occur during the development and progression of human OA. Furthermore, our findings indicate that strain-specific signatures exist within mouse cartilage that mirror human patterns. Further study of the establishment and potential pathogenic role of these DNA signatures is needed.

Indexed as

AgedAnimalsArthroplasty, Replacement, HipArthroplasty, Replacement, KneeCartilage, ArticularClassificationDisease SusceptibilityDNA, BacterialFemaleGenetic VariationHumansMaleMetagenomeMiceMicrobiotaMiddle AgedDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID31961065
PMCPMC7336391
OpenAlexW3000944098

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.