Evidence map›Paper›PMID 31960565›Full record

ArticleMolecular ecology2020

Independent domestication events in the blue-cheese fungus Penicillium roqueforti.

Emilie Dumas, Alice Feurtey, Ricardo C Rodríguez de la Vega, Stéphanie Le Prieur, Alodie Snirc, Monika Coton, Anne Thierry, Emmanuel Coton, Mélanie Le Piver, Daniel Roueyre and 3 more

Abstract read
In one paragraph

Article in Molecular ecology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Fungi as Food.Current topics in microbiology and immunology · 2025
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Domestication in dry-cured meatEvolutionary applications · 2023
    Article
  19. A new cheese population inEvolutionary applications · 2023
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Emilie DumasEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.ORCID 0000-0002-4528-9229
Alice FeurteyEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.ORCID 0000-0001-6315-9631
Ricardo C Rodríguez de la VegaEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.ORCID 0000-0002-9852-6654
Stéphanie Le PrieurEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.
Alodie SnircEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.
Monika CotonUniv Brest, Laboratoire Universitaire de Biodiversité et Ecologie Microbienne, Plouzané, France.ORCID 0000-0002-0148-6802
Anne ThierryScience et Technologie du Lait et de l'Œuf (STLO), UMR1253, Agrocampus Ouest, INRAE, Rennes, France.ORCID 0000-0002-9170-2889
Emmanuel CotonUniv Brest, Laboratoire Universitaire de Biodiversité et Ecologie Microbienne, Plouzané, France.ORCID 0000-0003-0912-8804
Mélanie Le PiverLaboratoire Interprofessionnel de Production - SAS L.I.P, Aurillac, France.
Daniel RoueyreLaboratoire Interprofessionnel de Production - SAS L.I.P, Aurillac, France.
Jeanne RoparsEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.ORCID 0000-0002-3740-9673
Antoine BrancaEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.ORCID 0000-0001-8475-1386
Tatiana GiraudEcologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.ORCID 0000-0002-2685-6478

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Domestication provides an excellent framework for studying adaptive divergence. Using population genomics and phenotypic assays, we reconstructed the domestication history of the blue cheese mould Penicillium roqueforti. We showed that this fungus was domesticated twice independently. The population used in Roquefort originated from an old domestication event associated with weak bottlenecks and exhibited traits beneficial for pre-industrial cheese production (slower growth in cheese and greater spore production on bread, the traditional multiplication medium). The other cheese population originated more recently from the selection of a single clonal lineage, was associated with all types of blue cheese worldwide except Roquefort, and displayed phenotypes more suited for industrial cheese production (high lipolytic activity, efficient cheese cavity colonization ability and salt tolerance). We detected genomic regions affected by recent positive selection and putative horizontal gene transfers. This study sheds light on the processes of rapid adaptation and raises questions about genetic resource conservation.

Indexed as

Food MicrobiologyCheeseDomesticationGene Transfer, HorizontalGenome, FungalPenicilliumPhenotypecheeseconvergencedomesticationfungiparallel adaptationPenicillium

Identifiers

PMID31960565
PMCPMC7497015

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.