Evidence map›Paper›PMID 31959993›Full record

ArticleNature genetics2020

Multitrait analysis of glaucoma identifies new risk loci and enables polygenic prediction of disease susceptibility and progression.

Jamie E Craig, Xikun Han, Ayub Qassim, Mark Hassall, Jessica N Cooke Bailey, Tyler G Kinzy, Anthony P Khawaja, Jiyuan An, Henry Marshall, Puya Gharahkhani and 51 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Nature genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05175651 (Prospective Electronic Polygenic Risk Study - Second Phase), which is not on this map. Cited by 198 papers, 12 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
198citing papers in PubMed, 12 pooled it
30.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05175651 nanot yet recruitingnot on this mapstarted 2023, after this paper: background citation

Prospective Electronic Polygenic Risk Study - Second Phase

TypeinterventionalSponsorScripps Translational Science InstituteRan2023 to 2027Enrolled10,000ConditionsCoronary Artery Disease, GlaucomaArmsGenetic risk assessment
3 · Its place in the literature

Who cites it

198 citing papers in PubMed, 12 syntheses or guidelines pooled it, 343 citations in OpenAlex.

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  7. High Blood Pressure and Intraocular Pressure: A Mendelian Randomization Study.Investigative ophthalmology & visual science · 2022
    Pooled it
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  9. Is Genetic Risk for Sleep Apnea Causally Linked With Glaucoma Susceptibility?Investigative ophthalmology & visual science · 2022
    Pooled it
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138 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

61 authors at 20 institutions in 8 countries.

Jamie E Craig *Department of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.
Xikun Han *Queensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia. Xikun.Han@qimrberghofer.edu.au.ORCID http://orcid.org/0000-0002-3823-7308
Ayub Qassim *Department of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.ORCID http://orcid.org/0000-0002-2911-2941
Mark HassallDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.ORCID http://orcid.org/0000-0002-6180-7954
Jessica N Cooke BaileyDepartment of Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University School of Medicine, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-4001-8702
Tyler G KinzyDepartment of Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University School of Medicine, Cleveland, OH, USA.
Anthony P KhawajaNational Institute for Health Research Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology, London, UK.ORCID http://orcid.org/0000-0001-6802-8585
Jiyuan AnQueensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.
Henry MarshallDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.ORCID http://orcid.org/0000-0002-4425-2272
Puya GharahkhaniQueensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0002-4203-5952
Robert P IgoDepartment of Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University School of Medicine, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-0024-1993
Stuart L GrahamFaculty of Medicine and Health Sciences, Macquarie University, Sydney, New South Wales, Australia.ORCID http://orcid.org/0000-0001-7519-969X
Paul R HealeyCentre for Vision Research, Westmead Institute for Medical Research, University of Sydney, Sydney, New South Wales, Australia.
Jue-Sheng OngQueensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0002-6062-710X
Tiger ZhouDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.
Owen SiggsDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.ORCID http://orcid.org/0000-0003-2840-4851
Matthew H LawQueensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0002-4303-8821
Emmanuelle SouzeauDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.ORCID http://orcid.org/0000-0002-2015-6577
Bronwyn RidgeDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.
Pirro G HysiDepartment of Ophthalmology, King's College London, St. Thomas' Hospital, London, UK.ORCID http://orcid.org/0000-0001-5752-2510
Kathryn P BurdonMenzies Institute for Medical Research, University of Tasmania, Hobart, Tasmania, Australia.ORCID http://orcid.org/0000-0001-8217-1249
Richard A MillsDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.
John LandersDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.
Jonathan B RuddleCentre for Eye Research Australia, University of Melbourne, Melbourne, Victoria, Australia.
Ashish AgarDepartment of Ophthalmology, Prince of Wales Hospital Randwick, Sydney, New South Wales, Australia.
Anna GalanopoulosSouth Australian Institute of Ophthalmology, Royal Adelaide Hospital, Adelaide, South Australia, Australia.
Andrew J R WhiteCentre for Vision Research, Westmead Institute for Medical Research, University of Sydney, Sydney, New South Wales, Australia.
Colin E WilloughbyBiomedical Sciences Research Institute, Ulster University, Coleraine, UK.ORCID http://orcid.org/0000-0002-1246-4166
Nicholas H AndrewDepartment of Ophthalmology, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.ORCID http://orcid.org/0000-0002-1545-9231
Stephen BestEye Department, Greenlane Clinical Centre, Auckland District Health Board, Auckland, New Zealand.
Andrea L VincentDepartment of Ophthalmology, University of Auckland, Auckland, New Zealand.ORCID http://orcid.org/0000-0002-4185-3267
Ivan GoldbergDiscipline of Ophthalmology, Faculty of Medicine and Health, University of Sydney, Sydney Eye Hospital, Sydney, New South Wales, Australia.ORCID http://orcid.org/0000-0001-7180-6202
Graham Radford-SmithQueensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0002-2047-6239
Nicholas G MartinQueensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.
Grant W MontgomeryInstitute for Molecular Bioscience, University of Queensland, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0002-4140-8139
Veronique VitartMedical Research Council Human Genetics Unit, Medical Research Council Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.ORCID http://orcid.org/0000-0002-4991-3797
Rene HoehnDepartment of Ophthalmology, University Hospital Bern, Inselspital, University of Bern, Bern, Switzerland.
Robert WojciechowskiDepartment of Epidemiology and Medicine, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Jost B JonasDepartment of Ophthalmology, Medical Faculty Mannheim of the Ruprecht-Karls-University of Heidelberg, Mannheim, Germany.ORCID http://orcid.org/0000-0003-2972-5227
Tin AungSingapore Eye Research Institute, Singapore National Eye Centre, Singapore, Singapore.
Louis R PasqualeDepartment of Ophthalmology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Angela Jane CreeClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.ORCID http://orcid.org/0000-0002-1987-8900
Sobha SivaprasadNational Institute for Health Research Moorfields Biomedical Research Centre, London, UK.
Neeru A VallabhDepartment of Eye and Vision Science, Institute of Ageing and Chronic Disease, University of Liverpool, Liverpool, UK.
NEIGHBORHOOD consortium
UK Biobank Eye and Vision Consortium
Ananth C ViswanathanNational Institute for Health Research Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology, London, UK.
Francesca PasuttoInstitute of Human Genetics, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Jonathan L HainesDepartment of Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University School of Medicine, Cleveland, OH, USA.
Caroline C W KlaverDepartment of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands.ORCID http://orcid.org/0000-0002-2355-5258
Cornelia M van DuijnDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands.
Robert J CassonSouth Australian Institute of Ophthalmology, University of Adelaide, Adelaide, South Australia, Australia.
Paul J FosterNational Institute for Health Research Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology, London, UK.ORCID http://orcid.org/0000-0002-4755-177X
Peng Tee KhawNational Institute for Health Research Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology, London, UK.ORCID http://orcid.org/0000-0002-8087-2268
Christopher J HammondDepartment of Ophthalmology, King's College London, St. Thomas' Hospital, London, UK.ORCID http://orcid.org/0000-0002-3227-2620
David A MackeyMenzies Institute for Medical Research, University of Tasmania, Hobart, Tasmania, Australia.
Paul MitchellDepartment of Ophthalmology and Westmead Institute for Medical Research, University of Sydney, Sydney, New South Wales, Australia.
Andrew J LoteryClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.ORCID http://orcid.org/0000-0001-5541-4305
Janey L WiggsDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, MA, USA.ORCID http://orcid.org/0000-0003-1890-3278
Alex W Hewitt *Menzies Institute for Medical Research, University of Tasmania, Hobart, Tasmania, Australia.ORCID http://orcid.org/0000-0002-5123-5999
Stuart MacGregor *Queensland Institute of Medical Research Berghofer Medical Research Institute, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0001-6731-8142
Flinders University · AUQIMR Berghofer Medical Research Institute · AUCase Western Reserve University · USMoorfields Eye Hospital NHS Foundation Trust · GBThe University of Sydney · AUErasmus MC · NLSt Thomas' Hospital · GBThe University of Queensland · AUUniversity of Southampton · GBUniversity of Tasmania · AUBelfast Health and Social Care Trust · GBFriedrich-Alexander-Universität Erlangen-Nürnberg · DEGreenlane Clinical Centre · NZHeidelberg University · DEIcahn School of Medicine at Mount Sinai · USInstitute of Genetics and Cancer · GBLions Eye Institute · AUMacquarie University · AUMassachusetts Eye and Ear Infirmary · USNational Institute for Health Research · GB

Funding

P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Janey L Wiggs · 2002 to 2026
$15.1M
Gene-Environment Interactions in GlaucomaR01EY015473 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI PASQUALE, LOUIS ROBERT · 2005 to 2021
$8.3M
The NEIGHBORHOOD: POAG Heritable Overall Operational DatabaseR01EY022305 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2012 to 2025
$7.9M
Module 3: Gene Expression/ProteomicsP30EY031631 · NEI · AUGUSTA UNIVERSITY · PI Xingjun Fan · 2020 to 2026
$3.6M
Genes and Environment Initiative in GlaucomaU01HG004728 · NHGRI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI PASQUALE, LOUIS ROBERT · 2008 to 2009
$1.0M
Long Noncoding RNA lncLOXL1 and Exfoliation Syndrome.R21EY028671 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2018 to 2019
$467k
Medical Research Council MC_PC_12028Medical Research Council MC_PC_17228Medical Research Council MC_QA137853Medical Research Council MC_UU_00007/10Medical Research Council MR/T040912/1NEI NIH HHS P30 EY014104NEI NIH HHS P30 EY031631NEI NIH HHS R01 EY015473NEI NIH HHS R01 EY022305NEI NIH HHS R21 EY028671NHGRI NIH HHS U01 HG004728Wellcome Trust
6 · The paper itself

Abstract

Glaucoma, a disease characterized by progressive optic nerve degeneration, can be prevented through timely diagnosis and treatment. We characterize optic nerve photographs of 67,040 UK Biobank participants and use a multitrait genetic model to identify risk loci for glaucoma. A glaucoma polygenic risk score (PRS) enables effective risk stratification in unselected glaucoma cases and modifies penetrance of the MYOC variant encoding p.Gln368Ter, the most common glaucoma-associated myocilin variant. In the unselected glaucoma population, individuals in the top PRS decile reach an absolute risk for glaucoma 10 years earlier than the bottom decile and are at 15-fold increased risk of developing advanced glaucoma (top 10% versus remaining 90%, odds ratio = 4.20). The PRS predicts glaucoma progression in prospectively monitored, early manifest glaucoma cases (P = 0.004) and surgical intervention in advanced disease (P = 3.6 × 10

Indexed as

Polymorphism, Single NucleotideAustraliaCase-Control StudiesCytoskeletal ProteinsDisease ProgressionEye ProteinsGenetic Predisposition to DiseaseGenome-Wide Association StudyGlaucomaGlycoproteinsHumansIntraocular PressureMultifactorial InheritanceMyocilinOdds RatioOptic NerveCytoskeletal ProteinsEye ProteinsGlycoproteinsMyocilin

Identifiers

PMID31959993
PMCPMC8056672
OpenAlexW3000547714

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.