Evidence map›Paper›PMID 31959785›Full record

ArticleScientific reports2020

Characterizing the microbiomes of Antarctic sponges: a functional metagenomic approach.

Mario Moreno-Pino, Antonia Cristi, James F Gillooly, Nicole Trefault

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

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  13. Microbiome profile of the Antarctic clam Laternula elliptica.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mario Moreno-PinoGEMA Center for Genomics, Ecology & Environment, Facultad de Ciencias, Universidad Mayor, Santiago, 8580745, Chile.
Antonia CristiGEMA Center for Genomics, Ecology & Environment, Facultad de Ciencias, Universidad Mayor, Santiago, 8580745, Chile.
James F GilloolyDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA.
Nicole TrefaultGEMA Center for Genomics, Ecology & Environment, Facultad de Ciencias, Universidad Mayor, Santiago, 8580745, Chile. nicole.trefault@umayor.cl.ORCID http://orcid.org/0000-0002-4388-6791

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Relatively little is known about the role of sponge microbiomes in the Antarctic marine environment, where sponges may dominate the benthic landscape. Specifically, we understand little about how taxonomic and functional diversity contributes to the symbiotic lifestyle and aids in nutrient cycling. Here we use functional metagenomics to investigate the community composition and metabolic potential of microbiomes from two abundant Antarctic sponges, Leucetta antarctica and Myxilla sp. Genomic and taxonomic analyses show that both sponges harbor a distinct microbial community with high fungal abundance, which differs from the surrounding seawater. Functional analyses reveal both sponge-associated microbial communities are enriched in functions related to the symbiotic lifestyle (e.g., CRISPR system, Eukaryotic-like proteins, and transposases), and in functions important for nutrient cycling. Both sponge microbiomes possessed genes necessary to perform processes important to nitrogen cycling (i.e., ammonia oxidation, nitrite oxidation, and denitrification), and carbon fixation. The latter indicates that Antarctic sponge microorganisms prefer light-independent pathways for CO

Indexed as

MicrobiotaAnimalsAntarctic RegionsCarbonCarbon DioxideChemoautotrophic GrowthLightMarine BiologyMetagenomicsNitrogenNutrientsPoriferaSeawaterSymbiosisCarbonCarbon DioxideNitrogenNutrients

Identifiers

PMID31959785
PMCPMC6971038

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.