Evidence map›Paper›PMID 31959557›Full record

ArticleMolecular cell2020

A Dimeric Structural Scaffold for PRC2-PCL Targeting to CpG Island Chromatin.

Siming Chen, Lianying Jiao, Xiuli Liu, Xin Yang, Xin Liu

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 92 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Siming ChenCecil H. and Ida Green Center for Reproductive Biology Sciences and Division of Basic Research, Department of Obstetrics and Gynecology, UT Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Lianying JiaoCecil H. and Ida Green Center for Reproductive Biology Sciences and Division of Basic Research, Department of Obstetrics and Gynecology, UT Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Xiuli LiuCecil H. and Ida Green Center for Reproductive Biology Sciences and Division of Basic Research, Department of Obstetrics and Gynecology, UT Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Xin YangCecil H. and Ida Green Center for Reproductive Biology Sciences and Division of Basic Research, Department of Obstetrics and Gynecology, UT Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Xin LiuCecil H. and Ida Green Center for Reproductive Biology Sciences and Division of Basic Research, Department of Obstetrics and Gynecology, UT Southwestern Medical Center, Dallas, TX 75390, USA; Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: xin.liu@utsouthwestern.edu.
Southwestern Medical CenterThe University of Texas Southwestern Medical Center · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Molecular Basis of Gene Regulation by Polycomb Repressive Complex 2R35GM136308 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LIU, XIN · 2020 to 2024
$2.9M
Molecular Mechanisms of Promoter-Terminator Gene LoopingR01GM114576 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LIU, XIN · 2015 to 2019
$1.6M
Structural Basis of Gene Regulation by Polycomb Repressive Complex 2R01GM121662 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LIU, XIN · 2017 to 2020
$1.3M
NCI NIH HHS P30 CA125123NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM114576NIGMS NIH HHS R01 GM121662NIGMS NIH HHS R35 GM136308
6 · The paper itself

Abstract

Diverse accessory subunits are involved in the recruitment of polycomb repressive complex 2 (PRC2) to CpG island (CGI) chromatin. Here we report the crystal structure of a SUZ12-RBBP4 complex bound to fragments of the accessory subunits PHF19 and JARID2. Unexpectedly, this complex adopts a dimeric structural architecture, accounting for PRC2 self-association that has long been implicated. The intrinsic PRC2 dimer is formed via domain swapping involving RBBP4 and the unique C2 domain of SUZ12. MTF2 and PHF19 associate with PRC2 at around the dimer interface and stabilize the dimer. Conversely, AEBP2 binding results in a drastic movement of the C2 domain, disrupting the intrinsic PRC2 dimer. PRC2 dimerization enhances CGI DNA binding by PCLs in pairs in vitro, reminiscent of the widespread phenomenon of transcription factor dimerization in active transcription. Loss of PRC2 dimerization impairs histone H3K27 trimethylation (H3K27me3) on chromatin at developmental gene loci in mouse embryonic stem cells.

Indexed as

CpG IslandsDNA MethylationProtein MultimerizationAnimalsCell DifferentiationChromatinDNA-Binding ProteinsHistonesHumansMiceMice, KnockoutMouse Embryonic Stem CellsNeoplasm ProteinsPolycomb Repressive Complex 2Protein ConformationRetinoblastoma-Binding Protein 4ChromatinDNA-Binding ProteinsHistonesMTF2 protein, humanNeoplasm ProteinsPHF19 protein, humanPolycomb Repressive Complex 2RBBP4 protein, humanRetinoblastoma-Binding Protein 4SUZ12 protein, humanSuz12 protein, mouseTranscription FactorschromatinCpG island (CGI)crystal structureepigeneticsgene silencinghistone methylationpolycomb-like (PCL)polycomb repressive complex 2 (PRC2)protein dimerizationstructural biology

Identifiers

PMID31959557
PMCPMC7571800
OpenAlexW2999758985

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.