Evidence map›Paper›PMID 31958219›Full record

ArticleTurkish journal of medical sciences2020

The relationship of the immune response mediator genes’ polymorphic variants with the methotrexate efficacy in juvenile idiopathic arthritis

Liliia Nazarova, Ksenia Danilko, Viktor Malievsky, Denis Karimov, Akhat Bakirov, Tatiana Viktorova

Open access · greenAbstract read
In one paragraph

Article in Turkish journal of medical sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Liliia NazarovaDepartment of Toxicology and Genetics, Ufa Research Institute of Occupational Health and Human Ecology, Ufa, RussiaORCID 0000-0002-9666-5650
Ksenia DanilkoCentral Research Laboratory, Bashkir State Medical University, Ufa, RussiaORCID 0000-0002-4374-2923
Viktor MalievskyDepartment of Hospital Pediatrics, Bashkir State Medical University, Ufa, RussiaORCID 0000-0003-0522-7442
Denis KarimovDepartment of Toxicology and Genetics, Ufa Research Institute of Occupational Health and Human Ecology, Ufa, RussiaORCID 0000-0003-0039-6757
Akhat BakirovUfa Research Institute of Occupational Health and Human Ecology, Ufa, RussiaORCID 0000-0003-3510-2595
Tatiana ViktorovaDepartment of Biology, Bashkir State Medical University, Ufa, RussiaORCID 0000-0001-8900-2480
Bashkir State Medical University · RUUfa Research Institute of Occupational Health and Human Ecology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background/aim: The aim of the study was to analyze the relationship of the immune response mediator genes’ polymorphic loci (TNFA rs1800629, LTA rs909253, IL1B rs16944, IL2-IL21 rs6822844, IL2RA rs2104286, IL6 rs1800795, IL10 rs1800872, MIF rs755622, CTLA4 rs3087243, NFKB1 rs28362491, PTPN22 rs2476601, PADI4 rs2240336) variants with the methotrexate efficacy in juvenile idiopathic arthritis (JIA). Materials and methods: The study included 274 JIA patients from the Republic of Bashkortostan, Russia. Achieving the American College of Rheumatology Pediatric 30 (ACR Pedi 30) response was regarded as the presence of the response to methotrexate (otherwise, as the absence), while achieving clinical remission on medication (Wallace et al., 2011) - as the sufficient response (otherwise, as the insufficient). Genotyping was conducted by the real-time polymerase chain reaction. Results: Associations with an altered risk of the nonresponse to methotrexate in JIA were observed for the alleles/genotypes of the lociIL10 rs1800872 (in girls) and NFKB1 rs28362491 (in girls); with an altered risk of the insufficient response to methotrexate in JIA – for the alleles/genotypes of the loci IL1B rs16944 (in boys), CTLA4 rs3087243 (in boys), NFKB1 rs28362491 (in girls) and the haplotype TNFA rs1800629*A - LTA rs909253*G (in girls). Conclusion: As a result of the study, the relationship of the alleles/genotypes of the IL1B rs16944, IL10 rs1800872, CTLA4 rs3087243, NFKB1 rs28362491 polymorphic lociand the TNFA rs1800629*A - LTA rs909253*G haplotype with the methotrexate efficacy in JIA was established (taking into account the differences by sex).

Indexed as

AllelesAntirheumatic AgentsArthritis, JuvenileChildFemaleGenetic LociGenetic Predisposition to DiseaseGenetic VariationGenotypeHaplotypesHumansImmunity, InnateImmunogeneticsMaleMethotrexatePolymorphism, Single NucleotideAntirheumatic AgentsMethotrexateJuvenile idiopathic arthritismethotrexate efficacypolymorphic locipredictors

Identifiers

PMID31958219
PMCPMC7379423
OpenAlexW3013728089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.