Evidence map›Paper›PMID 31957265›Full record

ArticleJournal of cellular and molecular medicine2020

Combined analysis of whole-exon sequencing and lncRNA sequencing in type 2 diabetes mellitus patients with obesity.

Tian An, Jing Zhang, Yu-Fei Liu, Yan-Xiang Wu, Juan Lian, Ting-Ye Wang, Yuan-Yuan Hu, Jia-Jian Zhu, Jiangpinghao Huang, Dan-Dan Zhao and 3 more

Abstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Tian AnTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Jing ZhangDepartment of Endocrinology, Tangshan People's Hospital, Tangshan, China.
Yu-Fei LiuThe Third Affiliated Hospital, Beijing University of Chinese Medicine, Beijing, China.
Yan-Xiang WuTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Juan LianTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Ting-Ye WangTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Yuan-Yuan HuTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Jia-Jian ZhuTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Jiangpinghao HuangUniversity of Southern California, Los Angeles, CA, USA.
Dan-Dan ZhaoTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Fang-Fang MoTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.
Si-Hua GaoTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.ORCID 0000-0002-4781-9684
Guang-Jian JiangTraditional Chinese Medicine School, Beijing University of Chinese Medicine, Beijing, China.ORCID 0000-0001-8394-5904

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study sought to find more exon mutation sites and lncRNA candidates associated with type 2 diabetes mellitus (T2DM) patients with obesity (O-T2DM). We used O-T2DM patients and healthy individuals to detect mutations in their peripheral blood by whole-exon sequencing. And changes in lncRNA expression caused by mutation sites were studied at the RNA level. Then, we performed GO analysis and KEGG pathway analysis. We found a total of 277 377 mutation sites between O-T2DM and healthy individuals. Then, we performed a DNA-RNA joint analysis. Based on the screening of harmful sites, 30 mutant genes shared in O-T2DM patients were screened. At the RNA level, mutations of 106 differentially expressed genes were displayed. Finally, a consensus mutation site and differential expression consensus gene screening were performed. In the current study, the results revealed significant differences in exon sites in peripheral blood between O-T2DM and healthy individuals, which may play an important role in the pathogenesis of O-T2DM by affecting the expression of the corresponding lncRNA. This study provides clues to the molecular mechanisms of metabolic disorders in O-T2DM patients at the DNA and RNA levels, as well as biomarkers of the risk of these disorders.

Indexed as

AdultCase-Control StudiesDiabetes Mellitus, Type 2DNAExome SequencingExonsFemaleGene ExpressionHumansMaleMiddle AgedMutationObesityRNARNA, Long NoncodingDNARNARNA, Long Noncodingdiabeteslong non-coding RNAmutation sitesobesity

Identifiers

PMID31957265
PMCPMC7028848

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.