Evidence map›Paper›PMID 31953984›Full record

ArticleJournal of biochemical and molecular toxicology2020

Diepoxybutane induces the expression of a novel p53-target gene XCL1 that mediates apoptosis in exposed human lymphoblasts.

Akamu J Ewunkem, Maya Deve, Scott H Harrison, Perpetua M Muganda

Open access · greenAbstract read
In one paragraph

Article in Journal of biochemical and molecular toxicology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Akamu J EwunkemDepartment of Energy and Environmental Systems, North Carolina A&T State University, Greensboro, North Carolina.
Maya DeveDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
Scott H HarrisonDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
Perpetua M MugandaDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.ORCID http://orcid.org/0000-0001-5928-6822
North Carolina Agricultural and Technical State University · US

Funding

SCORE: Enhancing Research Excellence at Southern University-Baton RougeS06GM076530 · NIGMS · SOUTHERN UNIV A&M COL BATON ROUGE · PI GRAY, WESLEY GEORGE · 2006 to 2009
$1.3M
CHARACTERIZATION OF NOVEL BUTADIENE-INDUCED PUTATIVE p53 TARGET GENESR15ES019306 · NIEHS · NORTH CAROLINA AGRI & TECH ST UNIV · PI MUGANDA, PERPETUA M · 2010 to 2010
$419k
NIEHS NIH HHS ES019306NIEHS NIH HHS R15 ES019306NIGMS NIH HHS GM076530NIGMS NIH HHS S06 GM076530
6 · The paper itself

Abstract

Diepoxybutane (DEB) is the most potent active metabolite of the environmental chemical 1,3-butadiene (BD). BD is a human carcinogen that exhibits multiorgan systems toxicity. Our previous studies demonstrated that the X-C motif chemokine ligand 1 (XCL1) gene expression was upregulated 3.3-fold in a p53-dependent manner in TK6 lymphoblasts undergoing DEB-induced apoptosis. The tumor-suppressor p53 protein is a transcription factor that regulates a wide variety of cellular processes, including apoptosis, through its various target genes. Thus, the objective of this study was to determine whether XCL1 is a novel direct p53 transcriptional target gene and deduce its role in DEB-induced toxicity in human lymphoblasts. We utilized the bioinformatics tool p53scan to search for known p53 consensus sequences within the XCL1 promoter region. The XCL1 gene promoter region was found to contain the p53 consensus sequences 5'-AGACATGCCTAGACATGCCT-3' at three positions relative to the transcription start site (TSS). Furthermore, the XCL1 promoter region was found, through reporter gene assays, to be transactivated at least threefold by wild-type p53 promoter in DEB-exposed human lymphoblasts. Inactivation of the XCL1 promoter p53-binding motif located at -2.579 kb relative to TSS reduced the transactivation function of p53 on this promoter in DEB-exposed cells by 97%. Finally, knockdown of XCL1 messenger RNA with specific small interfering RNA inhibited DEB-induced apoptosis in human lymphoblasts by 50%. These observations demonstrate, for the first time, that XCL1 is a novel DEB-induced direct p53 transcriptional target gene that mediates apoptosis in DEB-exposed human lymphoblasts.

Indexed as

Response ElementsApoptosisCell LineChemokines, CEpoxy CompoundsHumansLymphocytesTranscriptional ActivationTranscription, GeneticTumor Suppressor Protein p53Chemokines, CdiepoxybutaneEpoxy CompoundsTP53 protein, humanTumor Suppressor Protein p53XCL1 protein, humanapoptosisdiepoxybutanep53p53-target-geneXCL1

Identifiers

PMID31953984
PMCPMC7060116
OpenAlexW2999126721

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.