Evidence map›Paper›PMID 31953495›Full record

ArticleScientific reports2020

Comparative Proteomics Reveal Me31B's Interactome Dynamics, Expression Regulation, and Assembly Mechanism into Germ Granules during Drosophila Germline Development.

Aidan McCambridge, Dhruv Solanki, Nicholas Olchawa, Neal Govani, Jonathan C Trinidad, Ming Gao

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. P-body-like condensates in the germline.Seminars in cell & developmental biology · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. International journal of molecular sciences · 2021
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Aidan McCambridgeBiology Department, Indiana University Northwest, Gary, IN, USA.
Dhruv SolankiBiology Department, Indiana University Northwest, Gary, IN, USA.
Nicholas OlchawaBiology Department, Indiana University Northwest, Gary, IN, USA.
Neal GovaniBiology Department, Indiana University Northwest, Gary, IN, USA.
Jonathan C TrinidadDepartment of Chemistry, Indiana University, Bloomington, IN, USA.
Ming GaoBiology Department, Indiana University Northwest, Gary, IN, USA. minggao@iun.edu.
Indiana University Northwest · USIndiana University Bloomington · US

Funding

Determining the Role of Me31B Protein in Germ Cell DevelopmentR15HD092925 · NICHD · TRUSTEES OF INDIANA UNIVERSITY · PI GAO, MING · 2018 to 2023
$875k
NICHD NIH HHS R15 HD092925
6 · The paper itself

Abstract

Me31B is a protein component of Drosophila germ granules and plays an important role in germline development by interacting with other proteins and RNAs. To understand the dynamic changes that the Me31B interactome undergoes from oogenesis to early embryogenesis, we characterized the early embryo Me31B interactome and compared it to the known ovary interactome. The two interactomes shared RNA regulation proteins, glycolytic enzymes, and cytoskeleton/motor proteins, but the core germ plasm proteins Vas, Tud, and Aub were significantly decreased in the embryo interactome. Our follow-up on two RNA regulations proteins present in both interactomes, Tral and Cup, revealed that they colocalize with Me31B in nuage granules, P-bodies/sponge bodies, and possibly in germ plasm granules. We further show that Tral and Cup are both needed for maintaining Me31B protein level and mRNA stability, with Tral's effect being more specific. In addition, we provide evidence that Me31B likely colocalizes and interacts with germ plasm marker Vas in the ovaries and early embryo germ granules. Finally, we show that Me31B's localization in germ plasm is likely independent of the Osk-Vas-Tud-Aub germ plasm assembly pathway although its proper enrichment in the germ plasm may still rely on certain conserved germ plasm proteins.

Indexed as

AnimalsArabidopsis ProteinsDEAD-box RNA HelicasesDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianFemaleGene Expression Regulation, DevelopmentalMembrane Transport ProteinsOocytesPeptide Initiation FactorsProtein Interaction MapsProteomicsRibonucleoproteinsArabidopsis Proteinsaub protein, Drosophilacup protein, DrosophilaDEAD-box RNA HelicasesDrosophila ProteinsMe31B protein, DrosophilaMembrane Transport ProteinsPeptide Initiation FactorsRibonucleoproteinsTRAL protein, Drosophilatud protein, DrosophilaVAS protein, Arabidopsis

Identifiers

PMID31953495
PMCPMC6969142
OpenAlexW3000734662

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.