Evidence map›Paper›PMID 31953472›Full record

ArticleScientific reports2020

Quantitation of deoxynucleoside triphosphates by click reactions.

Chang-Yu Huang, Miriam Yagüe-Capilla, Dolores González-Pacanowska, Zee-Fen Chang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Cryo-EM maps of human DNA polymerase ε should be reevaluated in light of its unexpected behavior in vitro.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Chang-Yu HuangInstitute of Biochemistry and Molecular Biology, National Yang-Ming University, No.155, Sec. 2, Linong Street, Taipei, 112, Taiwan.
Miriam Yagüe-CapillaInstituto de Parasitología y Biomedicina "López-Neyra" (IPBLN), Consejo Superior de Investigaciones Científicas. Parque Tecnológico de Ciencias de la Salud, Avenida del Conocimiento, 17, 18016, Armilla, Granada, Spain.
Dolores González-PacanowskaInstituto de Parasitología y Biomedicina "López-Neyra" (IPBLN), Consejo Superior de Investigaciones Científicas. Parque Tecnológico de Ciencias de la Salud, Avenida del Conocimiento, 17, 18016, Armilla, Granada, Spain.
Zee-Fen ChangInstitute of Biochemistry and Molecular Biology, National Yang-Ming University, No.155, Sec. 2, Linong Street, Taipei, 112, Taiwan. zfchang@ntu.edu.tw.
National Taiwan University · TWConsejo Superior de Investigaciones Científicas · ESInstituto de Parasitología y Biomedicina "López - Neyra" · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The levels of the four deoxynucleoside triphosphates (dNTPs) are under strict control in the cell, as improper or imbalanced dNTP pools may lead to growth defects and oncogenesis. Upon treatment of cancer cells with therapeutic agents, changes in the canonical dNTPs levels may provide critical information for evaluating drug response and mode of action. The radioisotope-labeling enzymatic assay has been commonly used for quantitation of cellular dNTP levels. However, the disadvantage of this method is the handling of biohazard materials. Here, we described the use of click chemistry to replace radioisotope-labeling in template-dependent DNA polymerization for quantitation of the four canonical dNTPs. Specific oligomers were designed for dCTP, dTTP, dATP and dGTP measurement, and the incorporation of 5-ethynyl-dUTP or C8-alkyne-dCTP during the polymerization reaction allowed for fluorophore conjugation on immobilized oligonucleotides. The four reactions gave a linear correlation coefficient >0.99 in the range of the concentration of dNTPs present in 10

Indexed as

Click ChemistryCopperCycloaddition ReactionDeoxyadenine NucleotidesDeoxycytosine NucleotidesDeoxyguanine NucleotidesDeoxyribonucleotidesDeoxyuracil NucleotidesHCT116 CellsHEK293 CellsHumansK562 CellsRhodaminesStaining and LabelingThymine Nucleotides2'-deoxyadenosine triphosphate2'-deoxycytidine 5'-triphosphate5-carboxytetramethylrhodamine succinimidyl ester5-ethynyl-2'-deoxyuridylic acidCopperDeoxyadenine NucleotidesDeoxycytosine NucleotidesDeoxyguanine Nucleotidesdeoxyguanosine triphosphateDeoxyribonucleotidesDeoxyuracil NucleotidesRhodaminesthymidine 5'-triphosphateThymine Nucleotides

Identifiers

PMID31953472
PMCPMC6969045
OpenAlexW2999172304

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.