Evidence map›Paper›PMID 31953259›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

A strategy for designing allosteric modulators of transcription factor dimerization.

Sho Oasa, Vladana Vukojević, Rudolf Rigler, Igor F Tsigelny, Jean-Pierre Changeux, Lars Terenius

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
  7. Role ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  8. Article
  9. The Role of Neurodevelopmental Pathways in Brain Tumors.Frontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Sho OasaDepartment of Clinical Neuroscience, Karolinska Institutet, SE-17176 Stockholm, Sweden.
Vladana VukojevićDepartment of Clinical Neuroscience, Karolinska Institutet, SE-17176 Stockholm, Sweden.
Rudolf RiglerDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17177 Stockholm, Sweden.ORCID 0000-0003-4742-0857
Igor F TsigelnyDepartment of Neurosciences, University of California San Diego, La Jolla, CA 92093-0819.
Jean-Pierre ChangeuxInstitut Pasteur, Department of Neuroscience, Unité Neurobiologie Intégrative des Systèmes Cholinergiques, F-75724 Paris 15, France changeux@noos.fr lars.terenius@ki.se.ORCID 0000-0003-0297-1583
Lars TereniusDepartment of Clinical Neuroscience, Karolinska Institutet, SE-17176 Stockholm, Sweden; changeux@noos.fr lars.terenius@ki.se.ORCID 0000-0003-2880-9576
Karolinska Institutet · SEInstitut Pasteur · FRUniversity of California San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription factors (TFs) are fundamental in the regulation of gene expression in the development and differentiation of cells. They may act as oncogenes and when overexpressed in tumors become plausible targets for the design of antitumor agents. Homodimerization or heterodimerization of TFs are required for DNA binding and the association interface between subunits, for the design of allosteric modulators, appears as a privileged structure for the pharmacophore-based computational strategy. Based on this strategy, a set of compounds were earlier identified as potential suppressors of OLIG2 dimerization and found to inhibit tumor growth in a mouse glioblastoma cell line and in a whole-animal study. To investigate whether the antitumor activity is due to the predicted mechanism of action, we undertook a study of OLIG2 dimerization using fluorescence cross-correlation spectroscopy (FCCS) of live HEK cells transfected with 2 spectrally different OLIG2 clones. The selected compounds showed an effect with potency, which correlated with the earlier observed antitumor activity. The OLIG2 proteins showed change in diffusion time under compound treatment in line with dissociation from DNA. The data suggest a general approach of drug discovery based on the design of allosteric modulators of protein-protein interaction.

Indexed as

Allosteric RegulationAnimalsAntineoplastic AgentsCell Line, TumorDimerizationDNAGlioblastomaHEK293 CellsHumansMiceOligodendrocyte Transcription Factor 2Antineoplastic AgentsDNAOligodendrocyte Transcription Factor 2antitumor agentsfluorescence cross-correlation spectroscopyglioblastomaOLIG2transcription factor

Identifiers

PMID31953259
PMCPMC7007557
OpenAlexW3000145020

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.