Evidence map›Paper›PMID 31952808›Full record

ArticleBiophysical journal2020

Variable Mutations at the p53-R273 Oncogenic Hotspot Position Leads to Altered Properties.

Ankush Garg, Jagadish Prasad Hazra, Malay Kumar Sannigrahi, Sabyasachi Rakshit, Sharmistha Sinha

Abstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Mutant p53Molecular oncology · 2026
    Article
  2. A p53Molecular therapy. Oncology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Cancers · 2024
    Review
  9. Doxorubicin catalyses self-assembly of p53 by phase separation.Current research in structural biology · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. An integrated view of p53 dynamics, function, and reactivation.Current opinion in structural biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ankush GargInstitute of Nano Science and Technology, Habitat Centre, Punjab, India.
Jagadish Prasad HazraDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Manauli, Punjab, India.
Malay Kumar SannigrahiDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Manauli, Punjab, India.
Sabyasachi RakshitDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Manauli, Punjab, India. Electronic address: srakshit@iisermohali.ac.in.
Sharmistha SinhaInstitute of Nano Science and Technology, Habitat Centre, Punjab, India. Electronic address: sinhas@inst.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in p53 protein, especially in the DNA-binding domain, is one of the major hallmarks of cancer. The R273 position is a DNA-contact position and has several oncogenic variants. Surprisingly, cancer patients carrying different mutant variants of R273 in p53 have different survival rates, indicating that the DNA-contact inhibition may not be the sole reason for reduced survival with R273 variants. Here, we probed the properties of three major oncogenic variants of the wild-type (WT) p53: [R273H]p53, [R273C]p53, and [R273L]p53. Using a series of biophysical, biochemical, and theoretical simulation studies, we observe that these oncogenic variants of the p53 not only suffer a loss in DNA binding, but they also show distinct structural stability, aggregation, and toxicity profiles. The WTp53 and the [R273H]p53 show the least destabilization and aggregation propensity. [R273C]p53 aggregation is disulfide mediated, leading to cross-β, thioflavin-T-positive aggregates, whereas hydrophobic interactions dominate self-assembly in [R273L]p53, leading to a mixture of amyloid and amorphous aggregates. Molecular dynamics simulations indicate different contact maps and secondary structures for the different variants along the course of the simulations. Our study indicates that each of the R273 variants has its own distinct property of stability and self-assembly, the molecular basis of which may lead to different types of cancer pathogenesis in vivo. These studies will aid the design of therapeutic strategies for cancer using residue-specific or process-specific protein aggregation as a target.

Indexed as

NeoplasmsTumor Suppressor Protein p53DNAHumansMolecular Dynamics SimulationMutationDNATP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID31952808
PMCPMC7002923

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.