Evidence map›Paper›PMID 31952801›Full record

ArticleBiophysical journal2020

Membrane and Actin Tethering Transitions Help IQGAP1 Coordinate GTPase and Lipid Messenger Signaling.

Nicholaus J Trenton, R Tyler McLaughlin, Satya K Bellamkonda, David S Tsao, Alexandra Rodzinski, Emily M Mace, Jordan S Orange, Volker Schweikhard, Michael R Diehl

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Nicholaus J TrentonDepartment of Bioengineering, Rice University, Houston, Texas.
R Tyler McLaughlinDepartment of Bioengineering, Rice University, Houston, Texas; Graduate Program in Systems, Synthetic and Physical Biology, Rice University, Houston, Texas.
Satya K BellamkondaDepartment of Bioengineering, Rice University, Houston, Texas.
David S TsaoDepartment of Bioengineering, Rice University, Houston, Texas.
Alexandra RodzinskiDepartment of Bioengineering, Rice University, Houston, Texas.
Emily M MaceDepartment of Pediatrics, Columbia University Irving Medical Center, New York, New York.
Jordan S OrangeDepartment of Pediatrics, Columbia University Irving Medical Center, New York, New York.
Volker SchweikhardDepartment of Bioengineering, Rice University, Houston, Texas.
Michael R DiehlDepartment of Bioengineering, Rice University, Houston, Texas; Graduate Program in Systems, Synthetic and Physical Biology, Rice University, Houston, Texas; Department of Chemistry, Rice University, Houston, Texas. Electronic address: diehl@rice.edu.
Rice University · USColumbia University Irving Medical Center · US

Funding

Directing Function at the Natural Killer Cell Secretory Immunological SynapseR37AI067946 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Jordan Scott Orange · 2024 to 2026
$1.5M
Spatially-delineated System-level Analyses and Control of Cytoskeletal RegulationR01GM106027 · NIGMS · RICE UNIVERSITY · PI BALAZSI, GABOR, DIEHL, MICHAEL R · 2013 to 2016
$1.2M
NIAID NIH HHS R37 AI067946NIGMS NIH HHS R01 GM106027
6 · The paper itself

Abstract

The coordination of lipid messenger signaling with cytoskeletal regulation is central to many organelle-specific regulatory processes. This coupling often depends on the function of multidomain scaffolds that orchestrate transient interactions among multiple signaling intermediates and regulatory proteins on organelles. The number of possible scaffold interaction partners and the ability for these interactions to occur at different timescales makes investigations of scaffold functions challenging. This work employs live cell imaging to probe how the multidomain scaffold IQ motif containing GTPase activating protein 1 (IQGAP1) coordinates the activities of proteins affecting local actin polymerization, membrane processing, and phosphoinositide signaling. Using endosomes that are confined by a local actin network as a model system, we demonstrate that IQGAP1 can transition between different actin and endosomal membrane tethered states. Fast scaffold binding/disassociation transitions are shown to be driven by interactions between C-terminal scaffold domains and Rho GTPases at the membrane. Fluctuations in these binding modes are linked to negative regulation of actin polymerization. Although this control governs core elements of IQGAP1 dynamics, actin binding by the N-terminal calponin homology domain of the scaffold is shown to help the scaffold track the temporal development of endosome membrane markers, implying actin associations bolster membrane and actin coordination. Importantly, these effects are not easily distilled purely through standard (static) co-localization analyses or traditional pathway perturbations methods and were resolved by performing dynamic correlation and multiple regression analyses of IQGAP1 scaffold mutants. Using these capabilities with pharmacological inhibition, we provide evidence that membrane tethering is dependent on the activities of the lipid kinase phosphoinositide 3-kinase in addition to the Rho GTPases Rac1 and Cdc42. Overall, these methods and results point to a scaffold tethering mechanism that allows IQGAP1 to help control the amplitude of phosphoinositide lipid messenger signaling by coordinating signaling intermediate activities with the development and disassembly of local actin cytoskeletal networks.

Indexed as

ActinsGTP Phosphohydrolasesras GTPase-Activating ProteinsHumansLipidsPhosphatidylinositol 3-KinasesActinsGTP PhosphohydrolasesIQ motif containing GTPase activating protein 1LipidsPhosphatidylinositol 3-Kinasesras GTPase-Activating Proteins

Identifiers

PMID31952801
PMCPMC7002982
OpenAlexW2996843599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.