Evidence map›Paper›PMID 31951195›Full record

ArticleeLife2020

Transcriptional adaptation in

Vahan Serobyan, Zacharias Kontarakis, Mohamed A El-Brolosy, Jordan M Welker, Oleg Tolstenkov, Amr M Saadeldein, Nicholas Retzer, Alexander Gottschalk, Ann M Wehman, Didier Yr Stainier

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 51 citations in OpenAlex.

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  17. Mechanistic toxicology in light of genetic compensation.Toxicological sciences : an official journal of the Society of Toxicology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Vahan SerobyanDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.ORCID 0000-0001-5055-8422
Zacharias KontarakisDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Mohamed A El-BrolosyDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Jordan M WelkerDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Oleg TolstenkovInstitute for Biophysical Chemistry, Goethe University, Frankfurt Am Main, Germany.ORCID 0000-0002-6484-9965
Amr M SaadeldeinDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.ORCID 0000-0002-5971-2083
Nicholas RetzerDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Alexander GottschalkInstitute for Biophysical Chemistry, Goethe University, Frankfurt Am Main, Germany.ORCID 0000-0002-1197-6119
Ann M WehmanRudolf Virchow Center, University of Würzburg, Würzburg, Germany.ORCID 0000-0001-9826-4132
Didier Yr StainierDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.ORCID 0000-0002-0382-0026
Max Planck Institute for Heart and Lung Research · DEGoethe University Frankfurt · DEUniversity of Würzburg · DEUniversity of Zurich · CH

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
H2020 European Research Council 694455NIH HHS P40 OD010440
6 · The paper itself

Abstract

Transcriptional adaptation is a recently described phenomenon by which a mutation in one gene leads to the transcriptional modulation of related genes, termed adapting genes. At the molecular level, it has been proposed that the mutant mRNA, rather than the loss of protein function, activates this response. While several examples of transcriptional adaptation have been reported in zebrafish embryos and in mouse cell lines, it is not known whether this phenomenon is observed across metazoans. Here we report transcriptional adaptation in

Indexed as

Adaptation, BiologicalAnimalsArgonaute ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsDEAD-box RNA HelicasesGene Expression RegulationMutationRibonuclease IIIRNA, MessengerRNA StabilityTranscription, GeneticArgonaute ProteinsCaenorhabditis elegans ProteinsDEAD-box RNA HelicasesRibonuclease IIIRNA, MessengerC. eleganschromosomesgene expressiongeneticsgenomicsmRNA decayRNAismall RNAtranscriptional adaptation

Identifiers

PMID31951195
PMCPMC6968918
OpenAlexW2999809770

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.