Evidence map›Paper›PMID 31950832›Full record

ArticleJournal of proteome research2020

IKK-Mediated Regulation of the COP9 Signalosome via Phosphorylation of CSN5.

Jingzi Zhang, Ruoyu Zhao, Clinton Yu, Christine L N Bryant, Kenneth Wu, Zhihong Liu, Yibing Ding, Yue Zhao, Bin Xue, Zhen-Qiang Pan and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Jingzi ZhangMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.ORCID 0000-0002-7190-6243
Ruoyu ZhaoMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.
Clinton YuDepartment of Physiology and Biophysics, University of California, Irvine, California 92697, Unites States.
Christine L N BryantDepartment of Physiology and Biophysics, University of California, Irvine, California 92697, Unites States.
Kenneth WuDepartment of Oncological Sciences, Mount Sinai School of Medicine, New York, New York 10029, United States.
Zhihong LiuSchool of Life Science, Nanjing University, Nanjing 210023, China.
Yibing DingMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.
Yue ZhaoMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.
Bin XueMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.
Zhen-Qiang PanDepartment of Oncological Sciences, Mount Sinai School of Medicine, New York, New York 10029, United States.
Chaojun LiMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.
Lan HuangDepartment of Physiology and Biophysics, University of California, Irvine, California 92697, Unites States.ORCID 0000-0002-3140-4687
Lei FangMedical School and Model Animal Research Center of Nanjing University, Nanjing 210093, China.ORCID 0000-0002-2582-4845
Model Animal Research Center · CNUniversity of California, Irvine · USIcahn School of Medicine at Mount Sinai · USNanjing University · CN

Funding

Structural dynamics and function of the COP9 signalosomeR01GM130144 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUANG, LAN · 2018 to 2021
$1.2M
NIGMS NIH HHS R01 GM130144
6 · The paper itself

Abstract

The COP9 signalosome (CSN) is an evolutionarily conserved multisubunit protein complex, which controls protein degradation through deneddylation and inactivation of cullin-RING ubiquitin E3 ligases (CRLs). Recently, the CSN complex has been linked to the NF-κB signaling pathway due to its association with the IKK complex. However, how the CSN complex is regulated in this signaling pathway remains unclear. Here, we have carried out biochemical experiments and confirmed the interaction between the CSN and IKK complexes. In addition, we have determined that overexpression of IKKα or IKKβ leads to enhanced phosphorylation of CSN5, the catalytic subunit for CSN deneddylase activity. Mutational analyses have revealed that phosphorylation at serine 201 and threonine 205 of CSN5 impairs CSN-mediated deneddylation activity in vitro. Interestingly, TNF-α treatment not only enhances the interaction between CSN and IKK but also induces an IKK-dependent phosphorylation of CSN5 at serine 201, linking CSN to TNF-α signaling through IKK. Moreover, TNF-α treatment affects the CSN interaction network globally, especially the associations of CSN with the proteasome complex, eukaryotic translation initiation factor complex, and CRL components. Collectively, our results provide new insights into IKK-mediated regulation of CSN associated with the NF-κB signaling pathway.

Indexed as

NF-kappa BSignal TransductionCOP9 Signalosome ComplexPeptide HydrolasesPhosphorylationCOP9 Signalosome ComplexNF-kappa BPeptide HydrolasesCOP9 signalosomeCSN5deneddylationIKK complexNF-κB signaling pathwayphosphorylationTNF-α

Identifiers

PMID31950832
PMCPMC7299130
OpenAlexW3000269300

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.