Evidence map›Paper›PMID 31950190›Full record

ArticleDatabase : the journal of biological databases and curation2020

PCaLiStDB: a lifestyle database for precision prevention of prostate cancer.

Yalan Chen, Xingyun Liu, Yijun Yu, Chunjiang Yu, Lan Yang, Yuxin Lin, Ting Xi, Ziyun Ye, Zhe Feng, Bairong Shen

Open access · goldAbstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Translational Informatics for Natural Products as Antidepressant Agents.Frontiers in cell and developmental biology · 2021
    Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Yalan ChenCenter for Systems Biology, Soochow University, Suzhou 215006, China.
Xingyun LiuCenter for Systems Biology, Soochow University, Suzhou 215006, China.
Yijun YuDepartment of Medical Informatics, School of Medicine, Nantong University, Nantong 226001, China.
Chunjiang YuCenter for Systems Biology, Soochow University, Suzhou 215006, China.
Lan YangCenter for Systems Biology, Soochow University, Suzhou 215006, China.
Yuxin LinCenter for Systems Biology, Soochow University, Suzhou 215006, China.
Ting XiDepartment of Medical Informatics, School of Medicine, Nantong University, Nantong 226001, China.
Ziyun YeDepartment of Medical Informatics, School of Medicine, Nantong University, Nantong 226001, China.
Zhe FengDepartment of Medical Informatics, School of Medicine, Nantong University, Nantong 226001, China.
Bairong ShenInstitutes for Systems Genetics, West China Hospital, Sichuan University, No.17 Gaopeng Avenue, Chengdu 610041, China.
Nantong University · CNSoochow University · CNSichuan University · CNSuzhou Industrial Park Institute of Services Outsourcing · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we established a PCa related lifestyle database (PCaLiStDB) and collected the PCa-related lifestyles including foods, nutrients, life habits and social and environmental factors as well as associated genes and physiological and biochemical indexes together with the disease phenotypes and drugs. Data format standardization was implemented for the future Lifestyle-Wide Association Studies of PCa (PCa_LWAS). Currently, 2290 single-factor lifestyles and 856 joint effects of two or more lifestyles were collected. Among these, 394 are protective factors, 556 are risk factors, 45 are no-influencing factors, 52 are factors with contradictory views and 1977 factors are lacking effective literatures support. PCaLiStDB is expected to facilitate the prevention and control of PCa, as well as the promotion of mechanistic study of lifestyles on PCa. Database URL: http://www.sysbio.org.cn/pcalistdb/.

Indexed as

Life StyleProstatic NeoplasmsDatabases, FactualHumansMaleRisk Factors

Identifiers

PMID31950190
PMCPMC6966110
OpenAlexW3000329625

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.