Evidence map›Paper›PMID 31949045›Full record

ArticleThe Journal of biological chemistry2020

The basis for non-canonical ROK family function in the

David Coombes, James S Davies, Michael C Newton-Vesty, Christopher R Horne, Thanuja G Setty, Ramaswamy Subramanian, James W B Moir, Rosmarie Friemann, Santosh Panjikar, Michael D W Griffin and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

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  11. Structure and Function ofACS omega · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 5 countries.

David CoombesBiomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand.
James S DaviesBiomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand.
Michael C Newton-VestyBiomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand.
Christopher R HorneBiomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand.
Thanuja G SettyInstitute for Stem Cell Biology and Regenerative Medicine, NCBS, GKVK Campus, Bellary Road, Bangalore, Karnataka 560 065, India; The University of Trans-Disciplinary Health Sciences and Technology (TDU), Bangalore, KA 560064, India.
Ramaswamy SubramanianInstitute for Stem Cell Biology and Regenerative Medicine, NCBS, GKVK Campus, Bellary Road, Bangalore, Karnataka 560 065, India.
James W B MoirDepartment of Biology, University of York, Helsington, York YO10 5DD, United Kingdom.
Rosmarie FriemannDepartment of Clinical Microbiology, Sahlgrenska University Hospital, Guldhedsgatan 10A, 413 46 Gothenburg, Sweden; Centre for Antibiotic Resistance Research (CARe), University of Gothenburg, 40530 Gothenburg, Sweden.
Santosh PanjikarDepartment of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria 3800, Australia; Australian Synchrotron, ANSTO, Victoria 3168, Australia.
Michael D W GriffinDepartment of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria 3010, Australia.
Rachel A NorthBiomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand. Electronic address: rachel.north@dbb.su.se.
Renwick C J DobsonBiomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand; Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria 3010, Australia. Electronic address: renwick.dobson@canterbury.ac.nz.
University of Canterbury · NZThe University of Melbourne · AUAustralian Nuclear Science and Technology Organisation · AUInstitute for Stem Cell Biology and Regenerative Medicine · INSahlgrenska University Hospital · SEUniversity of Trans-Disciplinary Health Sciences and Technology · INUniversity of York · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In environments where glucose is limited, some pathogenic bacteria metabolize host-derived sialic acid as a nutrient source.

Indexed as

Amino Acid MotifsBacterial ProteinsBinding SitesBiocatalysisCatalytic DomainCrystallography, X-RayHexosaminesKineticsPhosphotransferases (Alcohol Group Acceptor)Protein StabilityProtein Structure, TertiaryRecombinant ProteinsStaphylococcus aureusSubstrate SpecificityZincBacterial ProteinsHexosaminesN-acetylmannosamineN-acylmannosamine kinasePhosphotransferases (Alcohol Group Acceptor)Recombinant ProteinsZincanalytical ultracentrifugationkinaseN-aceytlmannosamine kinaseopen reading framerepressorROK protein familysialic acidsmall-angle X-ray scattering (SAXS)Staphylococcus aureus (S. aureus)structural biologysugar kinaseX-ray crystallography

Identifiers

PMID31949045
PMCPMC7062169
OpenAlexW2998936827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.